Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC14.44□□□□□ -0.1
VAMP1P23763 BX088651.1-201ENST00000540551 451 ntBASIC14.44□□□□□ -0.1
VAMP1P23763 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VAMP1P23763 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.44□□□□□ -0.1
VAMP1P23763 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.44□□□□□ -0.1
VAMP1P23763 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VAMP1P23763 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
VAMP1P23763 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.44□□□□□ -0.1
VAMP1P23763 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
VAMP1P23763 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.43□□□□□ -0.1
VAMP1P23763 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.43□□□□□ -0.1
VAMP1P23763 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VAMP1P23763 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VAMP1P23763 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VAMP1P23763 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VAMP1P23763 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.43□□□□□ -0.1
VAMP1P23763 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VAMP1P23763 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
VAMP1P23763 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
VAMP1P23763 AL135905.2-201ENST00000584934 1404 ntBASIC14.43□□□□□ -0.1
VAMP1P23763 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
VAMP1P23763 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
VAMP1P23763 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.43□□□□□ -0.1
VAMP1P23763 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VAMP1P23763 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VAMP1P23763 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
VAMP1P23763 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VAMP1P23763 AC124947.2-201ENST00000547118 1133 ntBASIC14.43□□□□□ -0.1
VAMP1P23763 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC14.43□□□□□ -0.1
VAMP1P23763 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
VAMP1P23763 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VAMP1P23763 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC14.43□□□□□ -0.1
VAMP1P23763 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VAMP1P23763 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VAMP1P23763 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VAMP1P23763 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VAMP1P23763 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.43□□□□□ -0.1
VAMP1P23763 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.43□□□□□ -0.1
VAMP1P23763 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VAMP1P23763 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.43□□□□□ -0.1
VAMP1P23763 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.43□□□□□ -0.1
VAMP1P23763 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
VAMP1P23763 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.43□□□□□ -0.1
VAMP1P23763 AC024909.3-201ENST00000611513 2257 ntBASIC14.43□□□□□ -0.1
VAMP1P23763 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VAMP1P23763 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VAMP1P23763 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAMP1P23763 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VAMP1P23763 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAMP1P23763 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAMP1P23763 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.42□□□□□ -0.1
VAMP1P23763 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAMP1P23763 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAMP1P23763 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAMP1P23763 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAMP1P23763 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAMP1P23763 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAMP1P23763 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.42□□□□□ -0.1
VAMP1P23763 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAMP1P23763 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VAMP1P23763 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAMP1P23763 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VAMP1P23763 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
VAMP1P23763 CCR12P-201ENST00000446203 998 ntBASIC14.42□□□□□ -0.1
VAMP1P23763 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.42□□□□□ -0.1
VAMP1P23763 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VAMP1P23763 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.42□□□□□ -0.1
VAMP1P23763 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.42□□□□□ -0.1
VAMP1P23763 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14.42□□□□□ -0.1
VAMP1P23763 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14.42□□□□□ -0.1
VAMP1P23763 AC092865.7-201ENST00000641832 219 ntBASIC14.42□□□□□ -0.1
VAMP1P23763 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.42□□□□□ -0.1
VAMP1P23763 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.42□□□□□ -0.1
VAMP1P23763 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAMP1P23763 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.42□□□□□ -0.1
VAMP1P23763 AC097376.2-205ENST00000610159 5334 ntBASIC14.42□□□□□ -0.1
VAMP1P23763 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.42□□□□□ -0.1
VAMP1P23763 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.42□□□□□ -0.1
VAMP1P23763 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
VAMP1P23763 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
VAMP1P23763 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
VAMP1P23763 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAMP1P23763 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.42□□□□□ -0.1
VAMP1P23763 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAMP1P23763 AC023824.1-201ENST00000562945 2975 ntBASIC14.42□□□□□ -0.1
VAMP1P23763 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.42□□□□□ -0.1
VAMP1P23763 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
VAMP1P23763 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAMP1P23763 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
VAMP1P23763 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VAMP1P23763 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
VAMP1P23763 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
VAMP1P23763 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
VAMP1P23763 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
VAMP1P23763 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VAMP1P23763 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
VAMP1P23763 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VAMP1P23763 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.41□□□□□ -0.1
VAMP1P23763 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
VAMP1P23763 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms