Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRAFP15056 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRAFP15056 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRAFP15056 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRAFP15056 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.56■□□□□ 0.4
BRAFP15056 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRAFP15056 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.56■□□□□ 0.4
BRAFP15056 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BRAFP15056 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
BRAFP15056 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.56■□□□□ 0.4
BRAFP15056 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BRAFP15056 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
BRAFP15056 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
BRAFP15056 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
BRAFP15056 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BRAFP15056 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRAFP15056 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRAFP15056 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
BRAFP15056 TSPY19P-201ENST00000418461 509 ntBASIC17.56■□□□□ 0.4
BRAFP15056 TSPY18P-201ENST00000441642 509 ntBASIC17.56■□□□□ 0.4
BRAFP15056 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BRAFP15056 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.56■□□□□ 0.4
BRAFP15056 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.56■□□□□ 0.4
BRAFP15056 AC099336.1-202ENST00000602961 463 ntBASIC17.56■□□□□ 0.4
BRAFP15056 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRAFP15056 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.56■□□□□ 0.4
BRAFP15056 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.56■□□□□ 0.4
BRAFP15056 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.56■□□□□ 0.4
BRAFP15056 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRAFP15056 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
BRAFP15056 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRAFP15056 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.56■□□□□ 0.4
BRAFP15056 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRAFP15056 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRAFP15056 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
BRAFP15056 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRAFP15056 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRAFP15056 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.56■□□□□ 0.4
BRAFP15056 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRAFP15056 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
BRAFP15056 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRAFP15056 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.56■□□□□ 0.4
BRAFP15056 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
BRAFP15056 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
BRAFP15056 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRAFP15056 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.55■□□□□ 0.4
BRAFP15056 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
BRAFP15056 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BRAFP15056 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
BRAFP15056 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
BRAFP15056 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRAFP15056 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRAFP15056 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRAFP15056 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
BRAFP15056 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BRAFP15056 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
BRAFP15056 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
BRAFP15056 AL662844.4-201ENST00000606367 2838 ntBASIC17.55■□□□□ 0.4
BRAFP15056 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRAFP15056 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRAFP15056 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BRAFP15056 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.55■□□□□ 0.4
BRAFP15056 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.55■□□□□ 0.4
BRAFP15056 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRAFP15056 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRAFP15056 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BRAFP15056 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
BRAFP15056 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.55■□□□□ 0.4
BRAFP15056 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
BRAFP15056 UNC93B7-201ENST00000509439 705 ntBASIC17.55■□□□□ 0.4
BRAFP15056 AL732292.2-201ENST00000609649 430 ntBASIC17.55■□□□□ 0.4
BRAFP15056 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRAFP15056 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
BRAFP15056 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRAFP15056 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.55■□□□□ 0.4
BRAFP15056 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRAFP15056 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRAFP15056 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.55■□□□□ 0.4
BRAFP15056 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRAFP15056 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BRAFP15056 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BRAFP15056 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRAFP15056 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRAFP15056 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.55■□□□□ 0.4
BRAFP15056 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.55■□□□□ 0.4
BRAFP15056 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRAFP15056 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRAFP15056 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BRAFP15056 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRAFP15056 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
BRAFP15056 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
BRAFP15056 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
BRAFP15056 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRAFP15056 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRAFP15056 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRAFP15056 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BRAFP15056 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.54■□□□□ 0.4
BRAFP15056 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.54■□□□□ 0.4
BRAFP15056 AC112698.1-201ENST00000510299 916 ntBASIC17.54■□□□□ 0.4
BRAFP15056 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms