Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19■□□□□ 0.63
RARBP10826 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RARBP10826 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19■□□□□ 0.63
RARBP10826 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RARBP10826 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19■□□□□ 0.63
RARBP10826 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RARBP10826 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19■□□□□ 0.63
RARBP10826 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RARBP10826 AC097493.3-201ENST00000509725 367 ntBASIC19■□□□□ 0.63
RARBP10826 ALG1L8P-201ENST00000533887 760 ntBASIC19■□□□□ 0.63
RARBP10826 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19■□□□□ 0.63
RARBP10826 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RARBP10826 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19■□□□□ 0.63
RARBP10826 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
RARBP10826 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19■□□□□ 0.63
RARBP10826 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RARBP10826 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RARBP10826 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19■□□□□ 0.63
RARBP10826 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RARBP10826 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19■□□□□ 0.63
RARBP10826 NOC2LP2-201ENST00000407594 1944 ntBASIC19■□□□□ 0.63
RARBP10826 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19■□□□□ 0.63
RARBP10826 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19■□□□□ 0.63
RARBP10826 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RARBP10826 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RARBP10826 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RARBP10826 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RARBP10826 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RARBP10826 BICD1-207ENST00000551848 1962 ntBASIC18.99■□□□□ 0.63
RARBP10826 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
RARBP10826 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
RARBP10826 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.99■□□□□ 0.63
RARBP10826 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.99■□□□□ 0.63
RARBP10826 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
RARBP10826 LYSMD4-203ENST00000378904 2122 ntBASIC18.99■□□□□ 0.63
RARBP10826 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RARBP10826 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.99■□□□□ 0.63
RARBP10826 HCG4-201ENST00000418983 998 ntBASIC18.99■□□□□ 0.63
RARBP10826 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.99■□□□□ 0.63
RARBP10826 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.99■□□□□ 0.63
RARBP10826 GAPDHP21-201ENST00000450301 1010 ntBASIC18.99■□□□□ 0.63
RARBP10826 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.99■□□□□ 0.63
RARBP10826 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.99■□□□□ 0.63
RARBP10826 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.99■□□□□ 0.63
RARBP10826 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.99■□□□□ 0.63
RARBP10826 AC008267.7-201ENST00000624570 1194 ntBASIC18.99■□□□□ 0.63
RARBP10826 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RARBP10826 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RARBP10826 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RARBP10826 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RARBP10826 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.99■□□□□ 0.63
RARBP10826 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RARBP10826 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RARBP10826 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RARBP10826 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.99■□□□□ 0.63
RARBP10826 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RARBP10826 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RARBP10826 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RARBP10826 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RARBP10826 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RARBP10826 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
RARBP10826 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RARBP10826 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RARBP10826 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RARBP10826 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
RARBP10826 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RARBP10826 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RARBP10826 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RARBP10826 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
RARBP10826 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RARBP10826 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.98■□□□□ 0.63
RARBP10826 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.98■□□□□ 0.63
RARBP10826 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.98■□□□□ 0.63
RARBP10826 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.98■□□□□ 0.63
RARBP10826 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RARBP10826 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RARBP10826 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
RARBP10826 NOC2LP1-202ENST00000452600 2235 ntBASIC18.98■□□□□ 0.63
RARBP10826 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RARBP10826 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RARBP10826 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RARBP10826 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RARBP10826 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RARBP10826 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RARBP10826 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RARBP10826 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RARBP10826 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RARBP10826 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.97■□□□□ 0.63
RARBP10826 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RARBP10826 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RARBP10826 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.97■□□□□ 0.63
RARBP10826 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RARBP10826 GNAS-203ENST00000306120 1878 ntBASIC18.97■□□□□ 0.63
RARBP10826 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RARBP10826 AL354751.1-201ENST00000412768 1863 ntBASIC18.97■□□□□ 0.63
RARBP10826 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RARBP10826 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RARBP10826 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RARBP10826 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RARBP10826 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms