Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.1■□□□□ 0.65
HOXC6P09630 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
HOXC6P09630 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.1■□□□□ 0.65
HOXC6P09630 SERBP1P5-201ENST00000510079 1181 ntBASIC19.1■□□□□ 0.65
HOXC6P09630 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC19.1■□□□□ 0.65
HOXC6P09630 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.1■□□□□ 0.65
HOXC6P09630 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.1■□□□□ 0.65
HOXC6P09630 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.1■□□□□ 0.65
HOXC6P09630 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC6P09630 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC6P09630 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC6P09630 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC6P09630 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
HOXC6P09630 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXC6P09630 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC6P09630 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC6P09630 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC6P09630 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC6P09630 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
HOXC6P09630 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.09■□□□□ 0.65
HOXC6P09630 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.09■□□□□ 0.65
HOXC6P09630 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.09■□□□□ 0.65
HOXC6P09630 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC6P09630 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC6P09630 AC018470.1-201ENST00000624790 3129 ntBASIC19.09■□□□□ 0.65
HOXC6P09630 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC6P09630 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.09■□□□□ 0.65
HOXC6P09630 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
HOXC6P09630 AC142381.1-201ENST00000426099 345 ntBASIC19.09■□□□□ 0.65
HOXC6P09630 HLA-J-202ENST00000469281 1241 ntBASIC19.09■□□□□ 0.65
HOXC6P09630 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.09■□□□□ 0.65
HOXC6P09630 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.09■□□□□ 0.65
HOXC6P09630 AC027307.3-201ENST00000594262 1100 ntBASIC19.09■□□□□ 0.65
HOXC6P09630 AL590560.3-201ENST00000623350 461 ntBASIC19.09■□□□□ 0.65
HOXC6P09630 AC073592.8-201ENST00000624126 511 ntBASIC19.09■□□□□ 0.65
HOXC6P09630 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC19.09■□□□□ 0.65
HOXC6P09630 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.09■□□□□ 0.65
HOXC6P09630 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC6P09630 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC6P09630 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.09■□□□□ 0.65
HOXC6P09630 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
HOXC6P09630 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.09■□□□□ 0.65
HOXC6P09630 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC6P09630 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXC6P09630 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.08■□□□□ 0.65
HOXC6P09630 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HOXC6P09630 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HOXC6P09630 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HOXC6P09630 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
HOXC6P09630 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.65
HOXC6P09630 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
HOXC6P09630 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HOXC6P09630 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
HOXC6P09630 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HOXC6P09630 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
HOXC6P09630 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HOXC6P09630 EGFEM1P-202ENST00000431685 1563 ntBASIC19.08■□□□□ 0.65
HOXC6P09630 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HOXC6P09630 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.08■□□□□ 0.64
HOXC6P09630 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.08■□□□□ 0.64
HOXC6P09630 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.08■□□□□ 0.64
HOXC6P09630 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.08■□□□□ 0.64
HOXC6P09630 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
HOXC6P09630 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.08■□□□□ 0.64
HOXC6P09630 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.08■□□□□ 0.64
HOXC6P09630 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.08■□□□□ 0.64
HOXC6P09630 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC19.08■□□□□ 0.64
HOXC6P09630 AL138918.1-201ENST00000568306 659 ntBASIC19.08■□□□□ 0.64
HOXC6P09630 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
HOXC6P09630 AC009118.2-201ENST00000613275 655 ntBASIC19.08■□□□□ 0.64
HOXC6P09630 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HOXC6P09630 AP001350.2-201ENST00000625104 1094 ntBASIC19.08■□□□□ 0.64
HOXC6P09630 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HOXC6P09630 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.08■□□□□ 0.64
HOXC6P09630 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
HOXC6P09630 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.08■□□□□ 0.64
HOXC6P09630 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
HOXC6P09630 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HOXC6P09630 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
HOXC6P09630 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HOXC6P09630 AC100757.3-201ENST00000622361 1406 ntBASIC19.08■□□□□ 0.64
HOXC6P09630 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HOXC6P09630 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.08■□□□□ 0.64
HOXC6P09630 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC6P09630 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC6P09630 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC6P09630 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC6P09630 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
HOXC6P09630 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC6P09630 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC6P09630 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
HOXC6P09630 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC6P09630 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC19.07■□□□□ 0.64
HOXC6P09630 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC6P09630 PIN1P1-201ENST00000412108 996 ntBASIC19.07■□□□□ 0.64
HOXC6P09630 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HOXC6P09630 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.07■□□□□ 0.64
HOXC6P09630 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.07■□□□□ 0.64
HOXC6P09630 MPDU1-223ENST00000582151 728 ntBASIC19.07■□□□□ 0.64
HOXC6P09630 AC073389.1-201ENST00000595595 795 ntBASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms