Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQB2P05538 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQB2P05538 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQB2P05538 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQB2P05538 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
HLA-DQB2P05538 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQB2P05538 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.25■□□□□ 0.35
HLA-DQB2P05538 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQB2P05538 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQB2P05538 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQB2P05538 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-DQB2P05538 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HLA-DQB2P05538 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQB2P05538 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-DQB2P05538 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-DQB2P05538 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.25■□□□□ 0.35
HLA-DQB2P05538 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.25■□□□□ 0.35
HLA-DQB2P05538 FDX1P1-201ENST00000449115 551 ntBASIC17.25■□□□□ 0.35
HLA-DQB2P05538 AC093909.1-201ENST00000504731 1122 ntBASIC17.25■□□□□ 0.35
HLA-DQB2P05538 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-DQB2P05538 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQB2P05538 GGTLC5P-201ENST00000617623 998 ntBASIC17.25■□□□□ 0.35
HLA-DQB2P05538 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQB2P05538 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQB2P05538 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQB2P05538 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQB2P05538 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQB2P05538 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
HLA-DQB2P05538 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HLA-DQB2P05538 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQB2P05538 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-DQB2P05538 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQB2P05538 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQB2P05538 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQB2P05538 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQB2P05538 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DQB2P05538 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQB2P05538 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQB2P05538 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
HLA-DQB2P05538 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HLA-DQB2P05538 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQB2P05538 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQB2P05538 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQB2P05538 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQB2P05538 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.24■□□□□ 0.35
HLA-DQB2P05538 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQB2P05538 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQB2P05538 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HLA-DQB2P05538 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQB2P05538 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQB2P05538 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HLA-DQB2P05538 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQB2P05538 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.24■□□□□ 0.35
HLA-DQB2P05538 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQB2P05538 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
HLA-DQB2P05538 AC107918.2-201ENST00000530817 355 ntBASIC17.24■□□□□ 0.35
HLA-DQB2P05538 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQB2P05538 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.24■□□□□ 0.35
HLA-DQB2P05538 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQB2P05538 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.24■□□□□ 0.35
HLA-DQB2P05538 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.24■□□□□ 0.35
HLA-DQB2P05538 AC004790.2-201ENST00000623588 572 ntBASIC17.24■□□□□ 0.35
HLA-DQB2P05538 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.24■□□□□ 0.35
HLA-DQB2P05538 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQB2P05538 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.24■□□□□ 0.35
HLA-DQB2P05538 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQB2P05538 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQB2P05538 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
HLA-DQB2P05538 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQB2P05538 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQB2P05538 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DQB2P05538 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 AC108751.1-201ENST00000490852 363 ntBASIC17.23■□□□□ 0.35
HLA-DQB2P05538 IGHV3-22-201ENST00000520721 359 ntBASIC17.23■□□□□ 0.35
HLA-DQB2P05538 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 OR7E47P-204ENST00000575924 449 ntBASIC17.23■□□□□ 0.35
HLA-DQB2P05538 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.23■□□□□ 0.35
HLA-DQB2P05538 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms