Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.87■□□□□ 0.45
APOEP02649 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.87■□□□□ 0.45
APOEP02649 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.87■□□□□ 0.45
APOEP02649 RPS15P9-201ENST00000494093 319 ntBASIC17.87■□□□□ 0.45
APOEP02649 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.87■□□□□ 0.45
APOEP02649 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
APOEP02649 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
APOEP02649 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
APOEP02649 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
APOEP02649 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
APOEP02649 AL590787.1-201ENST00000568856 1315 ntBASIC17.87■□□□□ 0.45
APOEP02649 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
APOEP02649 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.87■□□□□ 0.45
APOEP02649 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
APOEP02649 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
APOEP02649 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.87■□□□□ 0.45
APOEP02649 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
APOEP02649 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
APOEP02649 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
APOEP02649 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.87■□□□□ 0.45
APOEP02649 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
APOEP02649 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
APOEP02649 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
APOEP02649 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
APOEP02649 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
APOEP02649 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.86■□□□□ 0.45
APOEP02649 AC011676.5-201ENST00000624864 2660 ntBASIC17.86■□□□□ 0.45
APOEP02649 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
APOEP02649 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
APOEP02649 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
APOEP02649 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.86■□□□□ 0.45
APOEP02649 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
APOEP02649 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
APOEP02649 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
APOEP02649 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
APOEP02649 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.86■□□□□ 0.45
APOEP02649 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
APOEP02649 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.86■□□□□ 0.45
APOEP02649 AP002414.1-201ENST00000391405 1147 ntBASIC17.86■□□□□ 0.45
APOEP02649 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.86■□□□□ 0.45
APOEP02649 AL022342.1-201ENST00000400363 863 ntBASIC17.86■□□□□ 0.45
APOEP02649 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
APOEP02649 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.86■□□□□ 0.45
APOEP02649 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.86■□□□□ 0.45
APOEP02649 IGHV3-22-201ENST00000520721 359 ntBASIC17.86■□□□□ 0.45
APOEP02649 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.86■□□□□ 0.45
APOEP02649 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.86■□□□□ 0.45
APOEP02649 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.86■□□□□ 0.45
APOEP02649 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
APOEP02649 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
APOEP02649 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.86■□□□□ 0.45
APOEP02649 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
APOEP02649 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
APOEP02649 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
APOEP02649 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
APOEP02649 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
APOEP02649 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
APOEP02649 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.86■□□□□ 0.45
APOEP02649 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
APOEP02649 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
APOEP02649 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
APOEP02649 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
APOEP02649 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
APOEP02649 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.85■□□□□ 0.45
APOEP02649 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
APOEP02649 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
APOEP02649 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
APOEP02649 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
APOEP02649 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
APOEP02649 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
APOEP02649 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
APOEP02649 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
APOEP02649 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
APOEP02649 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
APOEP02649 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.85■□□□□ 0.45
APOEP02649 PTCHD3P3-201ENST00000403073 906 ntBASIC17.85■□□□□ 0.45
APOEP02649 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
APOEP02649 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.85■□□□□ 0.45
APOEP02649 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
APOEP02649 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
APOEP02649 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
APOEP02649 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.85■□□□□ 0.45
APOEP02649 RNA5SP415-201ENST00000517246 115 ntBASIC17.85■□□□□ 0.45
APOEP02649 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
APOEP02649 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.85■□□□□ 0.45
APOEP02649 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.85■□□□□ 0.45
APOEP02649 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.85■□□□□ 0.45
APOEP02649 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.85■□□□□ 0.45
APOEP02649 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
APOEP02649 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
APOEP02649 AC093525.9-201ENST00000624961 1746 ntBASIC17.85■□□□□ 0.45
APOEP02649 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
APOEP02649 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
APOEP02649 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
APOEP02649 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
APOEP02649 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
APOEP02649 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
APOEP02649 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
APOEP02649 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
APOEP02649 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms