Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
KRT6AP02538 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT6AP02538 TUBB8P12-201ENST00000308911 1335 ntBASIC16.55■□□□□ 0.24
KRT6AP02538 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT6AP02538 TUBB7P-202ENST00000428444 1305 ntBASIC16.55■□□□□ 0.24
KRT6AP02538 TUBB8P7-204ENST00000567960 1332 ntBASIC16.55■□□□□ 0.24
KRT6AP02538 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT6AP02538 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KRT6AP02538 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
KRT6AP02538 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT6AP02538 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT6AP02538 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KRT6AP02538 AP002490.2-201ENST00000524791 560 ntBASIC16.55■□□□□ 0.24
KRT6AP02538 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.55■□□□□ 0.24
KRT6AP02538 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.55■□□□□ 0.24
KRT6AP02538 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
KRT6AP02538 MIR5100-201ENST00000579544 119 ntBASIC16.55■□□□□ 0.24
KRT6AP02538 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.55■□□□□ 0.24
KRT6AP02538 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KRT6AP02538 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.55■□□□□ 0.24
KRT6AP02538 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
KRT6AP02538 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
KRT6AP02538 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.55■□□□□ 0.24
KRT6AP02538 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT6AP02538 AC148477.5-201ENST00000625164 1645 ntBASIC16.55■□□□□ 0.24
KRT6AP02538 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KRT6AP02538 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.55■□□□□ 0.24
KRT6AP02538 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
KRT6AP02538 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
KRT6AP02538 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
KRT6AP02538 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
KRT6AP02538 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT6AP02538 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KRT6AP02538 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
KRT6AP02538 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT6AP02538 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT6AP02538 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT6AP02538 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
KRT6AP02538 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT6AP02538 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT6AP02538 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT6AP02538 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.54■□□□□ 0.24
KRT6AP02538 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.54■□□□□ 0.24
KRT6AP02538 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.54■□□□□ 0.24
KRT6AP02538 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT6AP02538 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT6AP02538 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT6AP02538 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
KRT6AP02538 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT6AP02538 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.54■□□□□ 0.24
KRT6AP02538 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT6AP02538 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.54■□□□□ 0.24
KRT6AP02538 NUS1P2-201ENST00000417358 873 ntBASIC16.54■□□□□ 0.24
KRT6AP02538 NUS1P1-201ENST00000446295 882 ntBASIC16.54■□□□□ 0.24
KRT6AP02538 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.54■□□□□ 0.24
KRT6AP02538 AC092119.3-201ENST00000612618 583 ntBASIC16.54■□□□□ 0.24
KRT6AP02538 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.54■□□□□ 0.24
KRT6AP02538 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.54■□□□□ 0.24
KRT6AP02538 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT6AP02538 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.54■□□□□ 0.24
KRT6AP02538 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
KRT6AP02538 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
KRT6AP02538 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
KRT6AP02538 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT6AP02538 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT6AP02538 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.54■□□□□ 0.24
KRT6AP02538 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT6AP02538 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT6AP02538 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT6AP02538 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT6AP02538 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
KRT6AP02538 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT6AP02538 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT6AP02538 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT6AP02538 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT6AP02538 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.53■□□□□ 0.24
KRT6AP02538 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
KRT6AP02538 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT6AP02538 AC097637.2-201ENST00000624096 1997 ntBASIC16.53■□□□□ 0.24
KRT6AP02538 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.53■□□□□ 0.24
KRT6AP02538 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
KRT6AP02538 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
KRT6AP02538 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
KRT6AP02538 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.53■□□□□ 0.24
KRT6AP02538 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT6AP02538 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.53■□□□□ 0.24
KRT6AP02538 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT6AP02538 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT6AP02538 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT6AP02538 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT6AP02538 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT6AP02538 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.53■□□□□ 0.24
KRT6AP02538 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.53■□□□□ 0.24
KRT6AP02538 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.53■□□□□ 0.24
KRT6AP02538 KRT18P35-201ENST00000510488 1269 ntBASIC16.53■□□□□ 0.24
KRT6AP02538 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.53■□□□□ 0.24
KRT6AP02538 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.53■□□□□ 0.24
KRT6AP02538 AL591684.3-201ENST00000605187 298 ntBASIC16.53■□□□□ 0.24
KRT6AP02538 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT6AP02538 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms