Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TOMM40O96008 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.4□□□□□ -0.26
TOMM40O96008 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TOMM40O96008 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
TOMM40O96008 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
TOMM40O96008 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TOMM40O96008 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC13.39□□□□□ -0.27
TOMM40O96008 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TOMM40O96008 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TOMM40O96008 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TOMM40O96008 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
TOMM40O96008 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TOMM40O96008 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TOMM40O96008 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
TOMM40O96008 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC13.39□□□□□ -0.27
TOMM40O96008 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.39□□□□□ -0.27
TOMM40O96008 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
TOMM40O96008 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.39□□□□□ -0.27
TOMM40O96008 CCS-201ENST00000310190 942 ntTSL 5 BASIC13.39□□□□□ -0.27
TOMM40O96008 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TOMM40O96008 GUK1-204ENST00000366721 689 ntTSL 3 BASIC13.39□□□□□ -0.27
TOMM40O96008 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TOMM40O96008 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC13.39□□□□□ -0.27
TOMM40O96008 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC13.39□□□□□ -0.27
TOMM40O96008 NTF6B-201ENST00000591913 560 ntBASIC13.39□□□□□ -0.27
TOMM40O96008 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TOMM40O96008 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC13.39□□□□□ -0.27
TOMM40O96008 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC13.39□□□□□ -0.27
TOMM40O96008 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TOMM40O96008 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TOMM40O96008 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC13.39□□□□□ -0.27
TOMM40O96008 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
TOMM40O96008 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TOMM40O96008 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.39□□□□□ -0.27
TOMM40O96008 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
TOMM40O96008 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.39□□□□□ -0.27
TOMM40O96008 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TOMM40O96008 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TOMM40O96008 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TOMM40O96008 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TOMM40O96008 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TOMM40O96008 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TOMM40O96008 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TOMM40O96008 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.39□□□□□ -0.27
TOMM40O96008 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC13.39□□□□□ -0.27
TOMM40O96008 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC13.39□□□□□ -0.27
TOMM40O96008 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TOMM40O96008 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TOMM40O96008 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.39□□□□□ -0.27
TOMM40O96008 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TOMM40O96008 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TOMM40O96008 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.38□□□□□ -0.27
TOMM40O96008 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.38□□□□□ -0.27
TOMM40O96008 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.38□□□□□ -0.27
TOMM40O96008 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TOMM40O96008 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TOMM40O96008 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TOMM40O96008 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TOMM40O96008 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TOMM40O96008 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TOMM40O96008 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TOMM40O96008 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TOMM40O96008 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TOMM40O96008 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TOMM40O96008 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TOMM40O96008 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TOMM40O96008 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TOMM40O96008 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TOMM40O96008 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TOMM40O96008 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TOMM40O96008 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TOMM40O96008 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TOMM40O96008 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TOMM40O96008 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TOMM40O96008 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC13.38□□□□□ -0.27
TOMM40O96008 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC13.38□□□□□ -0.27
TOMM40O96008 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC13.38□□□□□ -0.27
TOMM40O96008 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13.38□□□□□ -0.27
TOMM40O96008 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TOMM40O96008 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.38□□□□□ -0.27
TOMM40O96008 AD001527.2-201ENST00000622994 785 ntBASIC13.38□□□□□ -0.27
TOMM40O96008 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.38□□□□□ -0.27
TOMM40O96008 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
TOMM40O96008 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TOMM40O96008 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.38□□□□□ -0.27
TOMM40O96008 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TOMM40O96008 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TOMM40O96008 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TOMM40O96008 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TOMM40O96008 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TOMM40O96008 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TOMM40O96008 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
TOMM40O96008 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TOMM40O96008 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
TOMM40O96008 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TOMM40O96008 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TOMM40O96008 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TOMM40O96008 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TOMM40O96008 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TOMM40O96008 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms