Protein–RNA interactions for Protein: O95977

S1PR4, Sphingosine 1-phosphate receptor 4, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR4O95977 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
S1PR4O95977 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
S1PR4O95977 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.9■□□□□ 0.3
S1PR4O95977 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
S1PR4O95977 PAWRP1-201ENST00000451083 565 ntBASIC16.9■□□□□ 0.3
S1PR4O95977 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.9■□□□□ 0.3
S1PR4O95977 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
S1PR4O95977 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
S1PR4O95977 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.9■□□□□ 0.3
S1PR4O95977 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.9■□□□□ 0.3
S1PR4O95977 AL031008.1-201ENST00000619963 541 ntBASIC16.9■□□□□ 0.3
S1PR4O95977 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
S1PR4O95977 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
S1PR4O95977 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
S1PR4O95977 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.9■□□□□ 0.3
S1PR4O95977 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
S1PR4O95977 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
S1PR4O95977 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
S1PR4O95977 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
S1PR4O95977 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.9■□□□□ 0.3
S1PR4O95977 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.9■□□□□ 0.3
S1PR4O95977 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.9■□□□□ 0.3
S1PR4O95977 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
S1PR4O95977 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.9■□□□□ 0.3
S1PR4O95977 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
S1PR4O95977 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
S1PR4O95977 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
S1PR4O95977 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
S1PR4O95977 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
S1PR4O95977 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
S1PR4O95977 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
S1PR4O95977 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
S1PR4O95977 KRT8P49-201ENST00000604166 1432 ntBASIC16.89■□□□□ 0.29
S1PR4O95977 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
S1PR4O95977 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
S1PR4O95977 AL391256.1-201ENST00000443260 1855 ntBASIC16.89■□□□□ 0.29
S1PR4O95977 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
S1PR4O95977 AC079781.3-201ENST00000449110 356 ntBASIC16.89■□□□□ 0.29
S1PR4O95977 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.89■□□□□ 0.29
S1PR4O95977 AL160237.2-201ENST00000556165 472 ntBASIC16.89■□□□□ 0.29
S1PR4O95977 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.89■□□□□ 0.29
S1PR4O95977 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.89■□□□□ 0.29
S1PR4O95977 AL121894.2-201ENST00000602977 491 ntBASIC16.89■□□□□ 0.29
S1PR4O95977 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.89■□□□□ 0.29
S1PR4O95977 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
S1PR4O95977 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC16.89■□□□□ 0.29
S1PR4O95977 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.89■□□□□ 0.29
S1PR4O95977 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
S1PR4O95977 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
S1PR4O95977 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
S1PR4O95977 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.89■□□□□ 0.29
S1PR4O95977 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
S1PR4O95977 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
S1PR4O95977 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.89■□□□□ 0.29
S1PR4O95977 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.89■□□□□ 0.29
S1PR4O95977 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
S1PR4O95977 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.89■□□□□ 0.29
S1PR4O95977 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
S1PR4O95977 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
S1PR4O95977 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
S1PR4O95977 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.89■□□□□ 0.29
S1PR4O95977 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.89■□□□□ 0.29
S1PR4O95977 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
S1PR4O95977 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR4O95977 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
S1PR4O95977 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
S1PR4O95977 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
S1PR4O95977 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR4O95977 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR4O95977 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR4O95977 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR4O95977 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR4O95977 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR4O95977 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR4O95977 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR4O95977 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR4O95977 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.88■□□□□ 0.29
S1PR4O95977 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR4O95977 PTCHD3P3-201ENST00000403073 906 ntBASIC16.88■□□□□ 0.29
S1PR4O95977 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.88■□□□□ 0.29
S1PR4O95977 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.88■□□□□ 0.29
S1PR4O95977 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.88■□□□□ 0.29
S1PR4O95977 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.88■□□□□ 0.29
S1PR4O95977 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.88■□□□□ 0.29
S1PR4O95977 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR4O95977 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.88■□□□□ 0.29
S1PR4O95977 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.88■□□□□ 0.29
S1PR4O95977 AC104692.2-201ENST00000603054 253 ntBASIC16.88■□□□□ 0.29
S1PR4O95977 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR4O95977 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.88■□□□□ 0.29
S1PR4O95977 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR4O95977 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
S1PR4O95977 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR4O95977 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR4O95977 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.88■□□□□ 0.29
S1PR4O95977 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR4O95977 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
S1PR4O95977 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
S1PR4O95977 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.88■□□□□ 0.29
S1PR4O95977 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms