Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE6O95741 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
CPNE6O95741 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CPNE6O95741 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE6O95741 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE6O95741 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.75■□□□□ 0.27
CPNE6O95741 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
CPNE6O95741 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE6O95741 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.75■□□□□ 0.27
CPNE6O95741 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.75■□□□□ 0.27
CPNE6O95741 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE6O95741 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.75■□□□□ 0.27
CPNE6O95741 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.75■□□□□ 0.27
CPNE6O95741 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
CPNE6O95741 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.75■□□□□ 0.27
CPNE6O95741 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE6O95741 AC010654.1-201ENST00000615722 808 ntBASIC16.75■□□□□ 0.27
CPNE6O95741 GGTLC5P-201ENST00000617623 998 ntBASIC16.75■□□□□ 0.27
CPNE6O95741 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
CPNE6O95741 AC004790.2-201ENST00000623588 572 ntBASIC16.75■□□□□ 0.27
CPNE6O95741 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE6O95741 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE6O95741 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE6O95741 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE6O95741 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CPNE6O95741 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE6O95741 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE6O95741 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE6O95741 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE6O95741 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.75■□□□□ 0.27
CPNE6O95741 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.75■□□□□ 0.27
CPNE6O95741 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE6O95741 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
CPNE6O95741 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CPNE6O95741 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CPNE6O95741 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE6O95741 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.74■□□□□ 0.27
CPNE6O95741 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE6O95741 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE6O95741 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
CPNE6O95741 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE6O95741 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE6O95741 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE6O95741 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE6O95741 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CPNE6O95741 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE6O95741 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE6O95741 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE6O95741 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.74■□□□□ 0.27
CPNE6O95741 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CPNE6O95741 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE6O95741 AP002414.1-201ENST00000391405 1147 ntBASIC16.74■□□□□ 0.27
CPNE6O95741 MRPL20P1-201ENST00000400819 433 ntBASIC16.74■□□□□ 0.27
CPNE6O95741 AC211486.1-202ENST00000416371 468 ntBASIC16.74■□□□□ 0.27
CPNE6O95741 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.74■□□□□ 0.27
CPNE6O95741 HCG4B-203ENST00000450128 991 ntBASIC16.74■□□□□ 0.27
CPNE6O95741 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.74■□□□□ 0.27
CPNE6O95741 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.74■□□□□ 0.27
CPNE6O95741 AC211476.1-201ENST00000503899 468 ntBASIC16.74■□□□□ 0.27
CPNE6O95741 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.74■□□□□ 0.27
CPNE6O95741 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.74■□□□□ 0.27
CPNE6O95741 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.74■□□□□ 0.27
CPNE6O95741 AL353135.1-201ENST00000606729 504 ntBASIC16.74■□□□□ 0.27
CPNE6O95741 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.74■□□□□ 0.27
CPNE6O95741 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
CPNE6O95741 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CPNE6O95741 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE6O95741 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE6O95741 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE6O95741 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.74■□□□□ 0.27
CPNE6O95741 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE6O95741 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPNE6O95741 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CPNE6O95741 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE6O95741 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CPNE6O95741 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE6O95741 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE6O95741 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE6O95741 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE6O95741 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.73■□□□□ 0.27
CPNE6O95741 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CPNE6O95741 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
CPNE6O95741 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE6O95741 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CPNE6O95741 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
CPNE6O95741 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE6O95741 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE6O95741 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE6O95741 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE6O95741 PTCHD3P3-201ENST00000403073 906 ntBASIC16.73■□□□□ 0.27
CPNE6O95741 LINC00982-205ENST00000420957 435 ntBASIC16.73■□□□□ 0.27
CPNE6O95741 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.73■□□□□ 0.27
CPNE6O95741 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.73■□□□□ 0.27
CPNE6O95741 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CPNE6O95741 AC005829.1-201ENST00000570002 483 ntBASIC16.73■□□□□ 0.27
CPNE6O95741 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
CPNE6O95741 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE6O95741 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CPNE6O95741 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPNE6O95741 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms