Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.7■□□□□ 0.1
NKX2-2O95096 MRPL3P1-201ENST00000400109 1033 ntBASIC15.7■□□□□ 0.1
NKX2-2O95096 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.7■□□□□ 0.1
NKX2-2O95096 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.7■□□□□ 0.1
NKX2-2O95096 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.7■□□□□ 0.1
NKX2-2O95096 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.7■□□□□ 0.1
NKX2-2O95096 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.7■□□□□ 0.1
NKX2-2O95096 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.7■□□□□ 0.1
NKX2-2O95096 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.7■□□□□ 0.1
NKX2-2O95096 MIR7706-201ENST00000613747 67 ntBASIC15.7■□□□□ 0.1
NKX2-2O95096 AC005593.1-201ENST00000624894 515 ntBASIC15.7■□□□□ 0.1
NKX2-2O95096 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX2-2O95096 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX2-2O95096 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.7■□□□□ 0.1
NKX2-2O95096 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX2-2O95096 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX2-2O95096 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX2-2O95096 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX2-2O95096 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX2-2O95096 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NKX2-2O95096 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NKX2-2O95096 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NKX2-2O95096 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NKX2-2O95096 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX2-2O95096 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.69■□□□□ 0.1
NKX2-2O95096 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.69■□□□□ 0.1
NKX2-2O95096 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.69■□□□□ 0.1
NKX2-2O95096 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.69■□□□□ 0.1
NKX2-2O95096 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX2-2O95096 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.69■□□□□ 0.1
NKX2-2O95096 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX2-2O95096 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
NKX2-2O95096 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX2-2O95096 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX2-2O95096 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.69■□□□□ 0.1
NKX2-2O95096 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.69■□□□□ 0.1
NKX2-2O95096 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX2-2O95096 RNA5SP419-201ENST00000515908 135 ntBASIC15.69■□□□□ 0.1
NKX2-2O95096 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX2-2O95096 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.69■□□□□ 0.1
NKX2-2O95096 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
NKX2-2O95096 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.69■□□□□ 0.1
NKX2-2O95096 AL049840.3-201ENST00000602669 611 ntBASIC15.69■□□□□ 0.1
NKX2-2O95096 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.69■□□□□ 0.1
NKX2-2O95096 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.69■□□□□ 0.1
NKX2-2O95096 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.69■□□□□ 0.1
NKX2-2O95096 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
NKX2-2O95096 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX2-2O95096 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
NKX2-2O95096 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.69■□□□□ 0.1
NKX2-2O95096 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-2O95096 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-2O95096 AC006277.1-201ENST00000624348 1610 ntBASIC15.68■□□□□ 0.1
NKX2-2O95096 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.68■□□□□ 0.1
NKX2-2O95096 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.68■□□□□ 0.1
NKX2-2O95096 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-2O95096 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.68■□□□□ 0.1
NKX2-2O95096 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
NKX2-2O95096 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
NKX2-2O95096 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
NKX2-2O95096 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-2O95096 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-2O95096 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-2O95096 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-2O95096 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-2O95096 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.68■□□□□ 0.1
NKX2-2O95096 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.68■□□□□ 0.1
NKX2-2O95096 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-2O95096 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-2O95096 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-2O95096 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
NKX2-2O95096 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.68■□□□□ 0.1
NKX2-2O95096 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-2O95096 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
NKX2-2O95096 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-2O95096 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.68■□□□□ 0.1
NKX2-2O95096 AL662844.1-201ENST00000546340 181 ntBASIC15.68■□□□□ 0.1
NKX2-2O95096 SLC25A6P4-201ENST00000586535 553 ntBASIC15.68■□□□□ 0.1
NKX2-2O95096 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.68■□□□□ 0.1
NKX2-2O95096 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NKX2-2O95096 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.68■□□□□ 0.1
NKX2-2O95096 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-2O95096 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-2O95096 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-2O95096 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
NKX2-2O95096 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-2O95096 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.68■□□□□ 0.1
NKX2-2O95096 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
NKX2-2O95096 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.68■□□□□ 0.1
NKX2-2O95096 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NKX2-2O95096 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-2O95096 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-2O95096 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
NKX2-2O95096 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-2O95096 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NKX2-2O95096 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.68■□□□□ 0.1
NKX2-2O95096 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-2O95096 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NKX2-2O95096 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.68■□□□□ 0.1
NKX2-2O95096 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms