Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BEST1O76090 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BEST1O76090 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BEST1O76090 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
BEST1O76090 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BEST1O76090 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BEST1O76090 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BEST1O76090 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BEST1O76090 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
BEST1O76090 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BEST1O76090 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
BEST1O76090 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BEST1O76090 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BEST1O76090 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
BEST1O76090 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BEST1O76090 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BEST1O76090 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
BEST1O76090 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BEST1O76090 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
BEST1O76090 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
BEST1O76090 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BEST1O76090 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.8■□□□□ 0.44
BEST1O76090 AL078644.1-201ENST00000609881 752 ntBASIC17.8■□□□□ 0.44
BEST1O76090 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BEST1O76090 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BEST1O76090 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
BEST1O76090 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
BEST1O76090 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
BEST1O76090 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BEST1O76090 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
BEST1O76090 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BEST1O76090 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BEST1O76090 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BEST1O76090 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BEST1O76090 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
BEST1O76090 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BEST1O76090 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BEST1O76090 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BEST1O76090 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
BEST1O76090 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
BEST1O76090 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
BEST1O76090 AC005915.1-201ENST00000624912 2018 ntBASIC17.79■□□□□ 0.44
BEST1O76090 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
BEST1O76090 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
BEST1O76090 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BEST1O76090 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BEST1O76090 AC131009.4-201ENST00000624048 1740 ntBASIC17.79■□□□□ 0.44
BEST1O76090 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BEST1O76090 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BEST1O76090 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.79■□□□□ 0.44
BEST1O76090 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.79■□□□□ 0.44
BEST1O76090 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BEST1O76090 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BEST1O76090 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BEST1O76090 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.79■□□□□ 0.44
BEST1O76090 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.79■□□□□ 0.44
BEST1O76090 AP002472.1-201ENST00000577490 586 ntBASIC17.79■□□□□ 0.44
BEST1O76090 MIR4492-201ENST00000581627 80 ntBASIC17.79■□□□□ 0.44
BEST1O76090 AC006538.3-201ENST00000612495 578 ntBASIC17.79■□□□□ 0.44
BEST1O76090 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BEST1O76090 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
BEST1O76090 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BEST1O76090 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
BEST1O76090 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.79■□□□□ 0.44
BEST1O76090 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
BEST1O76090 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
BEST1O76090 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BEST1O76090 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BEST1O76090 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.79■□□□□ 0.44
BEST1O76090 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
BEST1O76090 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
BEST1O76090 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.79■□□□□ 0.44
BEST1O76090 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BEST1O76090 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
BEST1O76090 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
BEST1O76090 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
BEST1O76090 AL645728.1-201ENST00000366221 2101 ntBASIC17.78■□□□□ 0.44
BEST1O76090 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
BEST1O76090 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
BEST1O76090 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
BEST1O76090 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
BEST1O76090 AC012569.1-201ENST00000591191 1524 ntBASIC17.78■□□□□ 0.44
BEST1O76090 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
BEST1O76090 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.78■□□□□ 0.44
BEST1O76090 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.78■□□□□ 0.44
BEST1O76090 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
BEST1O76090 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
BEST1O76090 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BEST1O76090 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BEST1O76090 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BEST1O76090 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
BEST1O76090 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
BEST1O76090 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
BEST1O76090 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
BEST1O76090 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
BEST1O76090 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.78■□□□□ 0.44
BEST1O76090 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.78■□□□□ 0.44
BEST1O76090 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.78■□□□□ 0.44
BEST1O76090 DNAJB3-201ENST00000446806 729 ntBASIC17.78■□□□□ 0.44
BEST1O76090 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms