Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC7.48□□□□□ -1.21
USH2AO75445 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC7.48□□□□□ -1.21
USH2AO75445 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
USH2AO75445 AL353732.1-201ENST00000569618 1459 ntBASIC7.48□□□□□ -1.21
USH2AO75445 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC7.48□□□□□ -1.21
USH2AO75445 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
USH2AO75445 EFTUD1P1-204ENST00000560401 1798 ntBASIC7.48□□□□□ -1.21
USH2AO75445 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
USH2AO75445 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
USH2AO75445 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC7.48□□□□□ -1.21
USH2AO75445 SLC22A20-204ENST00000530038 1673 ntBASIC7.48□□□□□ -1.21
USH2AO75445 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
USH2AO75445 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC7.48□□□□□ -1.21
USH2AO75445 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
USH2AO75445 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC7.48□□□□□ -1.21
USH2AO75445 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
USH2AO75445 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC7.48□□□□□ -1.21
USH2AO75445 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC7.48□□□□□ -1.21
USH2AO75445 AC007551.1-201ENST00000457394 519 ntBASIC7.48□□□□□ -1.21
USH2AO75445 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC7.48□□□□□ -1.21
USH2AO75445 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC7.48□□□□□ -1.21
USH2AO75445 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC7.48□□□□□ -1.21
USH2AO75445 MIR3909-201ENST00000579518 119 ntBASIC7.48□□□□□ -1.21
USH2AO75445 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
USH2AO75445 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
USH2AO75445 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
USH2AO75445 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
USH2AO75445 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
USH2AO75445 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
USH2AO75445 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
USH2AO75445 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC7.48□□□□□ -1.21
USH2AO75445 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
USH2AO75445 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC7.48□□□□□ -1.21
USH2AO75445 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC7.48□□□□□ -1.21
USH2AO75445 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
USH2AO75445 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
USH2AO75445 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
USH2AO75445 HARS-204ENST00000438307 1789 ntTSL 2 BASIC7.48□□□□□ -1.21
USH2AO75445 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
USH2AO75445 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC7.48□□□□□ -1.21
USH2AO75445 MIR326-201ENST00000362220 95 ntBASIC7.48□□□□□ -1.21
USH2AO75445 BOLA2P3-201ENST00000404566 256 ntBASIC7.48□□□□□ -1.21
USH2AO75445 RAD18-204ENST00000418463 563 ntTSL 4 BASIC7.48□□□□□ -1.21
USH2AO75445 RAD18-205ENST00000421052 582 ntTSL 3 BASIC7.48□□□□□ -1.21
USH2AO75445 RPL13AP20-201ENST00000459725 609 ntBASIC7.48□□□□□ -1.21
USH2AO75445 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC7.48□□□□□ -1.21
USH2AO75445 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC7.48□□□□□ -1.21
USH2AO75445 AL031055.1-201ENST00000606362 631 ntBASIC7.48□□□□□ -1.21
USH2AO75445 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC7.48□□□□□ -1.21
USH2AO75445 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
USH2AO75445 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
USH2AO75445 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC7.48□□□□□ -1.21
USH2AO75445 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
USH2AO75445 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
USH2AO75445 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
USH2AO75445 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC7.48□□□□□ -1.21
USH2AO75445 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
USH2AO75445 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
USH2AO75445 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC7.48□□□□□ -1.21
USH2AO75445 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
USH2AO75445 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC7.48□□□□□ -1.21
USH2AO75445 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
USH2AO75445 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC7.48□□□□□ -1.21
USH2AO75445 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC7.48□□□□□ -1.21
USH2AO75445 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC7.48□□□□□ -1.21
USH2AO75445 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC7.48□□□□□ -1.21
USH2AO75445 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
USH2AO75445 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
USH2AO75445 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
USH2AO75445 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC7.48□□□□□ -1.21
USH2AO75445 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC7.48□□□□□ -1.21
USH2AO75445 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
USH2AO75445 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC7.48□□□□□ -1.21
USH2AO75445 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
USH2AO75445 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC7.48□□□□□ -1.21
USH2AO75445 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
USH2AO75445 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC7.47□□□□□ -1.21
USH2AO75445 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC7.47□□□□□ -1.21
USH2AO75445 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC7.47□□□□□ -1.21
USH2AO75445 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 MTRF1LP2-201ENST00000506027 1122 ntBASIC7.47□□□□□ -1.21
USH2AO75445 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC7.47□□□□□ -1.21
USH2AO75445 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC7.47□□□□□ -1.21
USH2AO75445 PIGL-212ENST00000581006 554 ntTSL 4 BASIC7.47□□□□□ -1.21
USH2AO75445 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC7.47□□□□□ -1.21
USH2AO75445 AC233724.13-201ENST00000598383 410 ntBASIC7.47□□□□□ -1.21
USH2AO75445 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC7.47□□□□□ -1.21
USH2AO75445 AL022328.1-201ENST00000610050 478 ntBASIC7.47□□□□□ -1.21
USH2AO75445 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC7.47□□□□□ -1.21
USH2AO75445 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 AMT-250ENST00000637682 1823 ntTSL 5 BASIC7.47□□□□□ -1.21
USH2AO75445 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC7.47□□□□□ -1.21
USH2AO75445 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
USH2AO75445 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms