Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.18■□□□□ 0.18
SCN2BO60939 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.18■□□□□ 0.18
SCN2BO60939 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCN2BO60939 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCN2BO60939 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCN2BO60939 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SCN2BO60939 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCN2BO60939 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.17■□□□□ 0.18
SCN2BO60939 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SCN2BO60939 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SCN2BO60939 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SCN2BO60939 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SCN2BO60939 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.17■□□□□ 0.18
SCN2BO60939 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCN2BO60939 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCN2BO60939 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCN2BO60939 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.17■□□□□ 0.18
SCN2BO60939 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCN2BO60939 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCN2BO60939 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCN2BO60939 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SCN2BO60939 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCN2BO60939 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.17■□□□□ 0.18
SCN2BO60939 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.17■□□□□ 0.18
SCN2BO60939 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SCN2BO60939 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.17■□□□□ 0.18
SCN2BO60939 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SCN2BO60939 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCN2BO60939 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.17■□□□□ 0.18
SCN2BO60939 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCN2BO60939 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SCN2BO60939 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SCN2BO60939 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SCN2BO60939 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SCN2BO60939 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.17■□□□□ 0.18
SCN2BO60939 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCN2BO60939 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.17■□□□□ 0.18
SCN2BO60939 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SCN2BO60939 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCN2BO60939 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
SCN2BO60939 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCN2BO60939 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SCN2BO60939 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCN2BO60939 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SCN2BO60939 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCN2BO60939 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
SCN2BO60939 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.16■□□□□ 0.18
SCN2BO60939 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.16■□□□□ 0.18
SCN2BO60939 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SCN2BO60939 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.16■□□□□ 0.18
SCN2BO60939 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCN2BO60939 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCN2BO60939 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCN2BO60939 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SCN2BO60939 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.16■□□□□ 0.18
SCN2BO60939 AC006449.5-201ENST00000610658 2098 ntBASIC16.16■□□□□ 0.18
SCN2BO60939 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCN2BO60939 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCN2BO60939 AP002414.1-201ENST00000391405 1147 ntBASIC16.16■□□□□ 0.18
SCN2BO60939 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SCN2BO60939 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.16■□□□□ 0.18
SCN2BO60939 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.16■□□□□ 0.18
SCN2BO60939 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.16■□□□□ 0.18
SCN2BO60939 ABCD1P5-201ENST00000445663 754 ntBASIC16.16■□□□□ 0.18
SCN2BO60939 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.16■□□□□ 0.18
SCN2BO60939 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.16■□□□□ 0.18
SCN2BO60939 AC074051.2-201ENST00000565115 352 ntBASIC16.16■□□□□ 0.18
SCN2BO60939 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.16■□□□□ 0.18
SCN2BO60939 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.16■□□□□ 0.18
SCN2BO60939 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.16■□□□□ 0.18
SCN2BO60939 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
SCN2BO60939 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SCN2BO60939 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.16■□□□□ 0.18
SCN2BO60939 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.16■□□□□ 0.18
SCN2BO60939 AP000550.4-202ENST00000639755 178 ntBASIC16.16■□□□□ 0.18
SCN2BO60939 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SCN2BO60939 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCN2BO60939 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.16■□□□□ 0.18
SCN2BO60939 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.16■□□□□ 0.18
SCN2BO60939 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.16■□□□□ 0.18
SCN2BO60939 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.16■□□□□ 0.18
SCN2BO60939 HLA-A-202ENST00000376806 1854 ntBASIC16.16■□□□□ 0.18
SCN2BO60939 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCN2BO60939 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCN2BO60939 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SCN2BO60939 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCN2BO60939 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
SCN2BO60939 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCN2BO60939 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCN2BO60939 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SCN2BO60939 DOC2GP-204ENST00000639052 2548 ntBASIC16.15■□□□□ 0.18
SCN2BO60939 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCN2BO60939 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCN2BO60939 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCN2BO60939 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCN2BO60939 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCN2BO60939 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCN2BO60939 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
SCN2BO60939 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.15■□□□□ 0.18
SCN2BO60939 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms