Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF11O60813 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF11O60813 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF11O60813 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PRAMEF11O60813 PMS2P1-201ENST00000431037 1228 ntBASIC17.23■□□□□ 0.35
PRAMEF11O60813 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.23■□□□□ 0.35
PRAMEF11O60813 KRT18P3-201ENST00000451602 1288 ntBASIC17.23■□□□□ 0.35
PRAMEF11O60813 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.23■□□□□ 0.35
PRAMEF11O60813 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF11O60813 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.23■□□□□ 0.35
PRAMEF11O60813 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF11O60813 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.23■□□□□ 0.35
PRAMEF11O60813 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.23■□□□□ 0.35
PRAMEF11O60813 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PRAMEF11O60813 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PRAMEF11O60813 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF11O60813 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PRAMEF11O60813 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF11O60813 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF11O60813 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF11O60813 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.23■□□□□ 0.35
PRAMEF11O60813 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.23■□□□□ 0.35
PRAMEF11O60813 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PRAMEF11O60813 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF11O60813 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PRAMEF11O60813 SLC22A20-204ENST00000530038 1673 ntBASIC17.23■□□□□ 0.35
PRAMEF11O60813 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF11O60813 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF11O60813 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.22■□□□□ 0.35
PRAMEF11O60813 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.22■□□□□ 0.35
PRAMEF11O60813 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PRAMEF11O60813 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF11O60813 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF11O60813 LTB4R2-202ENST00000528054 3092 ntBASIC17.22■□□□□ 0.35
PRAMEF11O60813 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.22■□□□□ 0.35
PRAMEF11O60813 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF11O60813 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PRAMEF11O60813 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF11O60813 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF11O60813 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF11O60813 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
PRAMEF11O60813 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF11O60813 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PRAMEF11O60813 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF11O60813 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.22■□□□□ 0.35
PRAMEF11O60813 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF11O60813 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF11O60813 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.22■□□□□ 0.35
PRAMEF11O60813 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PRAMEF11O60813 RNA5SP416-201ENST00000516838 111 ntBASIC17.22■□□□□ 0.35
PRAMEF11O60813 AP002490.2-201ENST00000524791 560 ntBASIC17.22■□□□□ 0.35
PRAMEF11O60813 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
PRAMEF11O60813 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.22■□□□□ 0.35
PRAMEF11O60813 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.22■□□□□ 0.35
PRAMEF11O60813 MIR4492-201ENST00000581627 80 ntBASIC17.22■□□□□ 0.35
PRAMEF11O60813 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.22■□□□□ 0.35
PRAMEF11O60813 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.22■□□□□ 0.35
PRAMEF11O60813 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF11O60813 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF11O60813 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF11O60813 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PRAMEF11O60813 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF11O60813 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRAMEF11O60813 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF11O60813 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.21■□□□□ 0.35
PRAMEF11O60813 LINC00895-201ENST00000629028 1637 ntBASIC17.21■□□□□ 0.35
PRAMEF11O60813 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PRAMEF11O60813 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF11O60813 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF11O60813 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF11O60813 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.21■□□□□ 0.35
PRAMEF11O60813 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF11O60813 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.21■□□□□ 0.35
PRAMEF11O60813 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.21■□□□□ 0.35
PRAMEF11O60813 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF11O60813 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
PRAMEF11O60813 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.21■□□□□ 0.35
PRAMEF11O60813 AC018845.2-201ENST00000568326 409 ntBASIC17.21■□□□□ 0.35
PRAMEF11O60813 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF11O60813 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.21■□□□□ 0.35
PRAMEF11O60813 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.21■□□□□ 0.35
PRAMEF11O60813 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.21■□□□□ 0.35
PRAMEF11O60813 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
PRAMEF11O60813 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF11O60813 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRAMEF11O60813 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PRAMEF11O60813 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.34
PRAMEF11O60813 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PRAMEF11O60813 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PRAMEF11O60813 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF11O60813 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.2■□□□□ 0.34
PRAMEF11O60813 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF11O60813 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF11O60813 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF11O60813 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF11O60813 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF11O60813 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PRAMEF11O60813 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRAMEF11O60813 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PRAMEF11O60813 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms