Protein–RNA interactions for Protein: O60759

CYTIP, Cytohesin-interacting protein, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTIPO60759 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CYTIPO60759 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.2■□□□□ 0.02
CYTIPO60759 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CYTIPO60759 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.2■□□□□ 0.02
CYTIPO60759 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CYTIPO60759 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.2■□□□□ 0.02
CYTIPO60759 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.2■□□□□ 0.02
CYTIPO60759 CRYGEP-201ENST00000412192 528 ntBASIC15.2■□□□□ 0.02
CYTIPO60759 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.2■□□□□ 0.02
CYTIPO60759 VN2R19P-201ENST00000442399 1052 ntBASIC15.2■□□□□ 0.02
CYTIPO60759 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.2■□□□□ 0.02
CYTIPO60759 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.2■□□□□ 0.02
CYTIPO60759 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.2■□□□□ 0.02
CYTIPO60759 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
CYTIPO60759 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.2■□□□□ 0.02
CYTIPO60759 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CYTIPO60759 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.2■□□□□ 0.02
CYTIPO60759 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CYTIPO60759 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CYTIPO60759 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CYTIPO60759 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CYTIPO60759 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CYTIPO60759 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CYTIPO60759 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CYTIPO60759 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.2■□□□□ 0.02
CYTIPO60759 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CYTIPO60759 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CYTIPO60759 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CYTIPO60759 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.2■□□□□ 0.02
CYTIPO60759 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CYTIPO60759 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CYTIPO60759 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CYTIPO60759 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.2■□□□□ 0.02
CYTIPO60759 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.2■□□□□ 0.02
CYTIPO60759 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CYTIPO60759 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CYTIPO60759 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CYTIPO60759 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CYTIPO60759 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
CYTIPO60759 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CYTIPO60759 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CYTIPO60759 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CYTIPO60759 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CYTIPO60759 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CYTIPO60759 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CYTIPO60759 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.19■□□□□ 0.02
CYTIPO60759 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
CYTIPO60759 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CYTIPO60759 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.19■□□□□ 0.02
CYTIPO60759 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CYTIPO60759 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CYTIPO60759 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CYTIPO60759 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
CYTIPO60759 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.19■□□□□ 0.02
CYTIPO60759 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CYTIPO60759 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CYTIPO60759 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CYTIPO60759 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CYTIPO60759 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CYTIPO60759 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.19■□□□□ 0.02
CYTIPO60759 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CYTIPO60759 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
CYTIPO60759 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
CYTIPO60759 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CYTIPO60759 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.19■□□□□ 0.02
CYTIPO60759 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.19■□□□□ 0.02
CYTIPO60759 AP000347.1-202ENST00000435868 847 ntBASIC15.19■□□□□ 0.02
CYTIPO60759 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CYTIPO60759 SLC25A6P2-201ENST00000497974 877 ntBASIC15.19■□□□□ 0.02
CYTIPO60759 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.19■□□□□ 0.02
CYTIPO60759 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.19■□□□□ 0.02
CYTIPO60759 OR7E47P-204ENST00000575924 449 ntBASIC15.19■□□□□ 0.02
CYTIPO60759 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.19■□□□□ 0.02
CYTIPO60759 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CYTIPO60759 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.19■□□□□ 0.02
CYTIPO60759 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.19■□□□□ 0.02
CYTIPO60759 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CYTIPO60759 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.19■□□□□ 0.02
CYTIPO60759 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CYTIPO60759 AC002310.6-201ENST00000624451 1377 ntBASIC15.19■□□□□ 0.02
CYTIPO60759 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CYTIPO60759 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CYTIPO60759 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CYTIPO60759 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CYTIPO60759 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.19■□□□□ 0.02
CYTIPO60759 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CYTIPO60759 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CYTIPO60759 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CYTIPO60759 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CYTIPO60759 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CYTIPO60759 NFIC-211ENST00000641145 8399 ntBASIC15.18■□□□□ 0.02
CYTIPO60759 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.18■□□□□ 0.02
CYTIPO60759 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.18■□□□□ 0.02
CYTIPO60759 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CYTIPO60759 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CYTIPO60759 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CYTIPO60759 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CYTIPO60759 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CYTIPO60759 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
CYTIPO60759 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms