Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.04■□□□□ -0
NPIPB4C9JG80 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB4C9JG80 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.04■□□□□ -0
NPIPB4C9JG80 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
NPIPB4C9JG80 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB4C9JG80 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB4C9JG80 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.04■□□□□ -0
NPIPB4C9JG80 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
NPIPB4C9JG80 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
NPIPB4C9JG80 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB4C9JG80 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.04■□□□□ -0
NPIPB4C9JG80 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB4C9JG80 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB4C9JG80 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB4C9JG80 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.04■□□□□ -0
NPIPB4C9JG80 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.04■□□□□ -0
NPIPB4C9JG80 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB4C9JG80 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB4C9JG80 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.04■□□□□ -0
NPIPB4C9JG80 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB4C9JG80 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB4C9JG80 RPS2P28-201ENST00000314255 741 ntBASIC15.04■□□□□ -0
NPIPB4C9JG80 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.04■□□□□ -0
NPIPB4C9JG80 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB4C9JG80 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.04■□□□□ -0
NPIPB4C9JG80 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.04■□□□□ -0
NPIPB4C9JG80 DUSP5P1-201ENST00000441325 1139 ntBASIC15.04■□□□□ -0
NPIPB4C9JG80 FAAHP1-202ENST00000446499 1238 ntBASIC15.04■□□□□ -0
NPIPB4C9JG80 SLC25A6P2-201ENST00000497974 877 ntBASIC15.04■□□□□ -0
NPIPB4C9JG80 IGHV3-65-201ENST00000523210 341 ntBASIC15.04■□□□□ -0
NPIPB4C9JG80 AC107918.2-201ENST00000530817 355 ntBASIC15.04■□□□□ -0
NPIPB4C9JG80 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.04■□□□□ -0
NPIPB4C9JG80 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.04■□□□□ -0
NPIPB4C9JG80 AC005412.3-201ENST00000580309 715 ntBASIC15.04■□□□□ -0
NPIPB4C9JG80 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.04■□□□□ -0
NPIPB4C9JG80 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.04■□□□□ -0
NPIPB4C9JG80 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.04■□□□□ -0
NPIPB4C9JG80 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.04■□□□□ -0
NPIPB4C9JG80 MIR1199-201ENST00000621445 119 ntBASIC15.04■□□□□ -0
NPIPB4C9JG80 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.04■□□□□ -0
NPIPB4C9JG80 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.04■□□□□ -0
NPIPB4C9JG80 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB4C9JG80 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
NPIPB4C9JG80 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
NPIPB4C9JG80 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.04■□□□□ -0
NPIPB4C9JG80 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.04■□□□□ -0
NPIPB4C9JG80 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.04■□□□□ -0
NPIPB4C9JG80 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.04■□□□□ -0
NPIPB4C9JG80 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.04■□□□□ -0
NPIPB4C9JG80 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPB4C9JG80 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.03■□□□□ -0
NPIPB4C9JG80 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPB4C9JG80 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPB4C9JG80 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.03■□□□□ -0
NPIPB4C9JG80 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPB4C9JG80 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.03■□□□□ -0
NPIPB4C9JG80 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.03■□□□□ -0
NPIPB4C9JG80 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPB4C9JG80 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.03■□□□□ -0
NPIPB4C9JG80 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPB4C9JG80 AL353732.1-201ENST00000569618 1459 ntBASIC15.03■□□□□ -0
NPIPB4C9JG80 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPB4C9JG80 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.03■□□□□ -0
NPIPB4C9JG80 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.03■□□□□ -0
NPIPB4C9JG80 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
NPIPB4C9JG80 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.03■□□□□ -0
NPIPB4C9JG80 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.03■□□□□ -0
NPIPB4C9JG80 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
NPIPB4C9JG80 RPS2P1-201ENST00000434010 821 ntBASIC15.03■□□□□ -0
NPIPB4C9JG80 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.03■□□□□ -0
NPIPB4C9JG80 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
NPIPB4C9JG80 AF186996.4-201ENST00000467186 377 ntBASIC15.03■□□□□ -0
NPIPB4C9JG80 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.03■□□□□ -0
NPIPB4C9JG80 AC105339.3-201ENST00000560043 636 ntBASIC15.03■□□□□ -0
NPIPB4C9JG80 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.03■□□□□ -0
NPIPB4C9JG80 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.03■□□□□ -0
NPIPB4C9JG80 TP73-AS1-207ENST00000624167 988 ntBASIC15.03■□□□□ -0
NPIPB4C9JG80 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPB4C9JG80 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPB4C9JG80 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
NPIPB4C9JG80 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.03■□□□□ -0
NPIPB4C9JG80 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.03■□□□□ -0
NPIPB4C9JG80 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
NPIPB4C9JG80 AC099398.1-201ENST00000567919 2776 ntBASIC15.03■□□□□ -0
NPIPB4C9JG80 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
NPIPB4C9JG80 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPB4C9JG80 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPB4C9JG80 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPB4C9JG80 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPB4C9JG80 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
NPIPB4C9JG80 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NPIPB4C9JG80 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
NPIPB4C9JG80 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.03■□□□□ -0
NPIPB4C9JG80 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
NPIPB4C9JG80 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NPIPB4C9JG80 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
NPIPB4C9JG80 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.02■□□□□ -0
NPIPB4C9JG80 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
NPIPB4C9JG80 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.02■□□□□ -0
NPIPB4C9JG80 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms