Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 AL157888.1-201ENST00000631930 593 ntBASIC17.69■□□□□ 0.42
SRRM3A6NNA2 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SRRM3A6NNA2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.69■□□□□ 0.42
SRRM3A6NNA2 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRRM3A6NNA2 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SRRM3A6NNA2 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRRM3A6NNA2 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.69■□□□□ 0.42
SRRM3A6NNA2 AC036111.1-201ENST00000533973 1582 ntBASIC17.69■□□□□ 0.42
SRRM3A6NNA2 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
SRRM3A6NNA2 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRRM3A6NNA2 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRRM3A6NNA2 AC024909.3-201ENST00000611513 2257 ntBASIC17.69■□□□□ 0.42
SRRM3A6NNA2 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRRM3A6NNA2 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.69■□□□□ 0.42
SRRM3A6NNA2 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SRRM3A6NNA2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRRM3A6NNA2 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SRRM3A6NNA2 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
SRRM3A6NNA2 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRRM3A6NNA2 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SRRM3A6NNA2 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRRM3A6NNA2 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRRM3A6NNA2 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.68■□□□□ 0.42
SRRM3A6NNA2 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SRRM3A6NNA2 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
SRRM3A6NNA2 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRRM3A6NNA2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SRRM3A6NNA2 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRRM3A6NNA2 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRRM3A6NNA2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRRM3A6NNA2 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRRM3A6NNA2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
SRRM3A6NNA2 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRRM3A6NNA2 MCCD1P1-208ENST00000445732 328 ntBASIC17.68■□□□□ 0.42
SRRM3A6NNA2 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRRM3A6NNA2 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRRM3A6NNA2 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
SRRM3A6NNA2 AC112482.1-201ENST00000492080 688 ntBASIC17.68■□□□□ 0.42
SRRM3A6NNA2 HLA-J-203ENST00000494367 1087 ntBASIC17.68■□□□□ 0.42
SRRM3A6NNA2 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
SRRM3A6NNA2 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.68■□□□□ 0.42
SRRM3A6NNA2 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SRRM3A6NNA2 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRRM3A6NNA2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRRM3A6NNA2 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SRRM3A6NNA2 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.68■□□□□ 0.42
SRRM3A6NNA2 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SRRM3A6NNA2 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
SRRM3A6NNA2 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SRRM3A6NNA2 RNF216P1-203ENST00000404404 2427 ntBASIC17.68■□□□□ 0.42
SRRM3A6NNA2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRRM3A6NNA2 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRRM3A6NNA2 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.68■□□□□ 0.42
SRRM3A6NNA2 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.68■□□□□ 0.42
SRRM3A6NNA2 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 AC112497.1-201ENST00000624824 639 ntBASIC17.67■□□□□ 0.42
SRRM3A6NNA2 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 AC099343.3-201ENST00000605834 2503 ntBASIC17.67■□□□□ 0.42
SRRM3A6NNA2 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SRRM3A6NNA2 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms