Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 AC069224.1-201ENST00000566372 1715 ntBASIC12.01□□□□□ -0.49
LINC01546A6NGU7 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 AL009178.2-201ENST00000597278 2719 ntBASIC12.01□□□□□ -0.49
LINC01546A6NGU7 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 AC103564.2-201ENST00000432853 1299 ntBASIC12.01□□□□□ -0.49
LINC01546A6NGU7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 C1QBPP2-201ENST00000528754 825 ntBASIC12.01□□□□□ -0.49
LINC01546A6NGU7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 OR6D1P-203ENST00000641209 4860 ntBASIC12.01□□□□□ -0.49
LINC01546A6NGU7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 AC009336.1-201ENST00000608941 1553 ntBASIC12.01□□□□□ -0.49
LINC01546A6NGU7 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC01546A6NGU7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
LINC01546A6NGU7 AC006277.1-201ENST00000624348 1610 ntBASIC12□□□□□ -0.49
LINC01546A6NGU7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC12□□□□□ -0.49
LINC01546A6NGU7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC12□□□□□ -0.49
LINC01546A6NGU7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC12□□□□□ -0.49
LINC01546A6NGU7 HARS-203ENST00000431330 1774 ntTSL 2 BASIC12□□□□□ -0.49
LINC01546A6NGU7 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01546A6NGU7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC01546A6NGU7 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01546A6NGU7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01546A6NGU7 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01546A6NGU7 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01546A6NGU7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC01546A6NGU7 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01546A6NGU7 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01546A6NGU7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12□□□□□ -0.49
LINC01546A6NGU7 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01546A6NGU7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
LINC01546A6NGU7 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01546A6NGU7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01546A6NGU7 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC12□□□□□ -0.49
LINC01546A6NGU7 AC007967.3-201ENST00000434308 558 ntBASIC12□□□□□ -0.49
LINC01546A6NGU7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC12□□□□□ -0.49
LINC01546A6NGU7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC12□□□□□ -0.49
LINC01546A6NGU7 AC107956.1-201ENST00000494359 873 ntBASIC12□□□□□ -0.49
LINC01546A6NGU7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01546A6NGU7 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC01546A6NGU7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC12□□□□□ -0.49
LINC01546A6NGU7 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC01546A6NGU7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC12□□□□□ -0.49
LINC01546A6NGU7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC01546A6NGU7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC01546A6NGU7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC01546A6NGU7 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC01546A6NGU7 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01546A6NGU7 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC01546A6NGU7 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12□□□□□ -0.49
LINC01546A6NGU7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01546A6NGU7 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12□□□□□ -0.49
LINC01546A6NGU7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC01546A6NGU7 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01546A6NGU7 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01546A6NGU7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
LINC01546A6NGU7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01546A6NGU7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01546A6NGU7 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01546A6NGU7 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC01546A6NGU7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC12□□□□□ -0.49
LINC01546A6NGU7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC01546A6NGU7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC01546A6NGU7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms