Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PLEKHD1A6NEE1 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC25.9■■□□□ 1.74
PLEKHD1A6NEE1 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC25.9■■□□□ 1.74
PLEKHD1A6NEE1 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC25.9■■□□□ 1.74
PLEKHD1A6NEE1 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PLEKHD1A6NEE1 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PLEKHD1A6NEE1 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
PLEKHD1A6NEE1 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC25.9■■□□□ 1.74
PLEKHD1A6NEE1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
PLEKHD1A6NEE1 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC25.9■■□□□ 1.74
PLEKHD1A6NEE1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PLEKHD1A6NEE1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC25.9■■□□□ 1.74
PLEKHD1A6NEE1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC25.89■■□□□ 1.74
PLEKHD1A6NEE1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC25.89■■□□□ 1.74
PLEKHD1A6NEE1 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
PLEKHD1A6NEE1 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
PLEKHD1A6NEE1 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PLEKHD1A6NEE1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
PLEKHD1A6NEE1 AC004408.2-201ENST00000623613 2777 ntBASIC25.89■■□□□ 1.74
PLEKHD1A6NEE1 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC25.89■■□□□ 1.74
PLEKHD1A6NEE1 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC25.89■■□□□ 1.74
PLEKHD1A6NEE1 RNA5-8SN1-201ENST00000610460 153 ntBASIC25.89■■□□□ 1.74
PLEKHD1A6NEE1 RNA5-8SN5-202ENST00000612463 153 ntBASIC25.89■■□□□ 1.74
PLEKHD1A6NEE1 RNA5-8SN4-201ENST00000613359 153 ntBASIC25.89■■□□□ 1.74
PLEKHD1A6NEE1 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC25.89■■□□□ 1.74
PLEKHD1A6NEE1 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PLEKHD1A6NEE1 SPTSSB-204ENST00000617024 1292 ntBASIC25.89■■□□□ 1.74
PLEKHD1A6NEE1 RNA5-8SN5-201ENST00000619471 153 ntBASIC25.89■■□□□ 1.74
PLEKHD1A6NEE1 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC25.89■■□□□ 1.74
PLEKHD1A6NEE1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PLEKHD1A6NEE1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
PLEKHD1A6NEE1 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
PLEKHD1A6NEE1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
PLEKHD1A6NEE1 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC25.88■■□□□ 1.73
PLEKHD1A6NEE1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PLEKHD1A6NEE1 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PLEKHD1A6NEE1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
PLEKHD1A6NEE1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PLEKHD1A6NEE1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PLEKHD1A6NEE1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PLEKHD1A6NEE1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC25.88■■□□□ 1.73
PLEKHD1A6NEE1 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PLEKHD1A6NEE1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PLEKHD1A6NEE1 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
PLEKHD1A6NEE1 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PLEKHD1A6NEE1 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
PLEKHD1A6NEE1 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC25.88■■□□□ 1.73
PLEKHD1A6NEE1 MTND6P24-201ENST00000440466 518 ntBASIC25.88■■□□□ 1.73
PLEKHD1A6NEE1 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC25.88■■□□□ 1.73
PLEKHD1A6NEE1 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PLEKHD1A6NEE1 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC25.88■■□□□ 1.73
PLEKHD1A6NEE1 GPR53P-205ENST00000457298 1084 ntBASIC25.88■■□□□ 1.73
PLEKHD1A6NEE1 IGHV3-71-201ENST00000523324 359 ntBASIC25.88■■□□□ 1.73
PLEKHD1A6NEE1 BANF1P1-201ENST00000553684 263 ntBASIC25.88■■□□□ 1.73
PLEKHD1A6NEE1 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC25.88■■□□□ 1.73
PLEKHD1A6NEE1 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PLEKHD1A6NEE1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC25.88■■□□□ 1.73
PLEKHD1A6NEE1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PLEKHD1A6NEE1 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PLEKHD1A6NEE1 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PLEKHD1A6NEE1 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC25.88■■□□□ 1.73
PLEKHD1A6NEE1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PLEKHD1A6NEE1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PLEKHD1A6NEE1 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC25.88■■□□□ 1.73
PLEKHD1A6NEE1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PLEKHD1A6NEE1 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PLEKHD1A6NEE1 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC25.87■■□□□ 1.73
PLEKHD1A6NEE1 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
PLEKHD1A6NEE1 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC25.87■■□□□ 1.73
PLEKHD1A6NEE1 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC25.87■■□□□ 1.73
PLEKHD1A6NEE1 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC25.87■■□□□ 1.73
PLEKHD1A6NEE1 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC25.87■■□□□ 1.73
PLEKHD1A6NEE1 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PLEKHD1A6NEE1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC25.87■■□□□ 1.73
PLEKHD1A6NEE1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PLEKHD1A6NEE1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PLEKHD1A6NEE1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PLEKHD1A6NEE1 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
PLEKHD1A6NEE1 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
PLEKHD1A6NEE1 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC25.86■■□□□ 1.73
PLEKHD1A6NEE1 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PLEKHD1A6NEE1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
PLEKHD1A6NEE1 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PLEKHD1A6NEE1 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
PLEKHD1A6NEE1 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PLEKHD1A6NEE1 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PLEKHD1A6NEE1 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC25.86■■□□□ 1.73
PLEKHD1A6NEE1 AL133215.2-201ENST00000609242 977 ntBASIC25.86■■□□□ 1.73
PLEKHD1A6NEE1 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC25.86■■□□□ 1.73
PLEKHD1A6NEE1 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC25.86■■□□□ 1.73
PLEKHD1A6NEE1 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PLEKHD1A6NEE1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
PLEKHD1A6NEE1 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
PLEKHD1A6NEE1 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
PLEKHD1A6NEE1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
PLEKHD1A6NEE1 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
PLEKHD1A6NEE1 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC25.85■■□□□ 1.73
PLEKHD1A6NEE1 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
PLEKHD1A6NEE1 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
PLEKHD1A6NEE1 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms