Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MEIS3P1A6NDR6 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
MEIS3P1A6NDR6 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MEIS3P1A6NDR6 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MEIS3P1A6NDR6 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 AC068587.6-202ENST00000641839 5619 ntBASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 AL391807.1-203ENST00000604392 2365 ntBASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 KRT18P48-201ENST00000434763 852 ntBASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 MTCL1P1-201ENST00000446207 792 ntBASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 GCSHP2-201ENST00000560971 527 ntBASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 MIR4785-201ENST00000585005 73 ntBASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 AL513477.1-201ENST00000602865 2407 ntBASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MEIS3P1A6NDR6 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
MEIS3P1A6NDR6 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 GCSHP5-201ENST00000443090 522 ntBASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 AL512604.3-201ENST00000569583 964 ntBASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 AC109462.3-201ENST00000573934 613 ntBASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 AL136038.4-201ENST00000603606 1261 ntBASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 FAM87A-204ENST00000613235 858 ntBASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 EGFEM1P-202ENST00000431685 1563 ntBASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.64□□□□□ -0.07
MEIS3P1A6NDR6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms