Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC66A2RUB6 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC66A2RUB6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC66A2RUB6 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CCDC66A2RUB6 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CCDC66A2RUB6 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC66A2RUB6 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC66A2RUB6 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC66A2RUB6 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC66A2RUB6 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC66A2RUB6 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CCDC66A2RUB6 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC66A2RUB6 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC66A2RUB6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC66A2RUB6 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC66A2RUB6 IGHGP-201ENST00000390555 1178 ntBASIC18.52■□□□□ 0.56
CCDC66A2RUB6 LINC01023-201ENST00000606054 436 ntBASIC18.52■□□□□ 0.56
CCDC66A2RUB6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
CCDC66A2RUB6 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC66A2RUB6 AC006449.5-201ENST00000610658 2098 ntBASIC18.52■□□□□ 0.56
CCDC66A2RUB6 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC66A2RUB6 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
CCDC66A2RUB6 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC66A2RUB6 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC66A2RUB6 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC66A2RUB6 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.52■□□□□ 0.55
CCDC66A2RUB6 CYP2T1P-202ENST00000641596 2535 ntBASIC18.52■□□□□ 0.55
CCDC66A2RUB6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC66A2RUB6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.52■□□□□ 0.55
CCDC66A2RUB6 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC66A2RUB6 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC66A2RUB6 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC66A2RUB6 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC66A2RUB6 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC66A2RUB6 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
CCDC66A2RUB6 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC66A2RUB6 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC66A2RUB6 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC66A2RUB6 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC66A2RUB6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC66A2RUB6 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC66A2RUB6 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC66A2RUB6 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC66A2RUB6 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC66A2RUB6 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC66A2RUB6 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC66A2RUB6 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC66A2RUB6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CCDC66A2RUB6 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC66A2RUB6 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC66A2RUB6 AP003733.1-201ENST00000491725 852 ntBASIC18.51■□□□□ 0.55
CCDC66A2RUB6 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC66A2RUB6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC66A2RUB6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.51■□□□□ 0.55
CCDC66A2RUB6 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
CCDC66A2RUB6 PAUPAR-201ENST00000630360 2965 ntBASIC18.51■□□□□ 0.55
CCDC66A2RUB6 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC66A2RUB6 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC66A2RUB6 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC66A2RUB6 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CCDC66A2RUB6 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC66A2RUB6 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC66A2RUB6 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC66A2RUB6 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC66A2RUB6 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC66A2RUB6 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CCDC66A2RUB6 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC66A2RUB6 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC66A2RUB6 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC66A2RUB6 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC66A2RUB6 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC66A2RUB6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC66A2RUB6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC66A2RUB6 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC66A2RUB6 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC66A2RUB6 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC66A2RUB6 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC66A2RUB6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC66A2RUB6 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CCDC66A2RUB6 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC66A2RUB6 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC66A2RUB6 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.5■□□□□ 0.55
CCDC66A2RUB6 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC66A2RUB6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC66A2RUB6 AC011558.1-201ENST00000623459 338 ntBASIC18.5■□□□□ 0.55
CCDC66A2RUB6 AC097493.4-201ENST00000641197 219 ntBASIC18.5■□□□□ 0.55
CCDC66A2RUB6 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC66A2RUB6 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC66A2RUB6 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC66A2RUB6 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC66A2RUB6 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CCDC66A2RUB6 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC66A2RUB6 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC66A2RUB6 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC66A2RUB6 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC66A2RUB6 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CCDC66A2RUB6 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC66A2RUB6 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC66A2RUB6 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC66A2RUB6 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms