Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 RNF216P1-203ENST00000404404 2427 ntBASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPDC1A2A3K4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.03■□□□□ 0.8
PTPDC1A2A3K4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.03■□□□□ 0.8
PTPDC1A2A3K4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPDC1A2A3K4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.03■□□□□ 0.8
PTPDC1A2A3K4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PTPDC1A2A3K4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
PTPDC1A2A3K4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PTPDC1A2A3K4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PTPDC1A2A3K4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PTPDC1A2A3K4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPDC1A2A3K4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PTPDC1A2A3K4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPDC1A2A3K4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PTPDC1A2A3K4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPDC1A2A3K4 BX842568.4-201ENST00000421222 227 ntBASIC20.03■□□□□ 0.8
PTPDC1A2A3K4 AC007967.2-201ENST00000432613 625 ntBASIC20.03■□□□□ 0.8
PTPDC1A2A3K4 AL591424.1-201ENST00000442569 1213 ntBASIC20.03■□□□□ 0.8
PTPDC1A2A3K4 AC009947.1-201ENST00000444350 727 ntBASIC20.03■□□□□ 0.8
PTPDC1A2A3K4 KRT18P3-201ENST00000451602 1288 ntBASIC20.03■□□□□ 0.8
PTPDC1A2A3K4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
PTPDC1A2A3K4 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
PTPDC1A2A3K4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PTPDC1A2A3K4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.03■□□□□ 0.8
PTPDC1A2A3K4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.03■□□□□ 0.8
PTPDC1A2A3K4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.03■□□□□ 0.8
PTPDC1A2A3K4 AC004706.3-202ENST00000621574 984 ntBASIC20.03■□□□□ 0.8
PTPDC1A2A3K4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.03■□□□□ 0.8
PTPDC1A2A3K4 PGM5P2-202ENST00000637225 1043 ntBASIC20.03■□□□□ 0.8
PTPDC1A2A3K4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.03■□□□□ 0.8
PTPDC1A2A3K4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.03■□□□□ 0.8
PTPDC1A2A3K4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPDC1A2A3K4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPDC1A2A3K4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.03■□□□□ 0.8
PTPDC1A2A3K4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPDC1A2A3K4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.02■□□□□ 0.8
PTPDC1A2A3K4 NCF1C-201ENST00000438382 1427 ntBASIC20.02■□□□□ 0.8
PTPDC1A2A3K4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.02■□□□□ 0.8
PTPDC1A2A3K4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PTPDC1A2A3K4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPDC1A2A3K4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPDC1A2A3K4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.02■□□□□ 0.8
PTPDC1A2A3K4 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPDC1A2A3K4 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPDC1A2A3K4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PTPDC1A2A3K4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.02■□□□□ 0.8
PTPDC1A2A3K4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PTPDC1A2A3K4 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.02■□□□□ 0.8
PTPDC1A2A3K4 PGAM5P1-201ENST00000518923 814 ntBASIC20.02■□□□□ 0.8
PTPDC1A2A3K4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.02■□□□□ 0.8
PTPDC1A2A3K4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.02■□□□□ 0.8
PTPDC1A2A3K4 AC139530.3-201ENST00000620344 690 ntBASIC20.02■□□□□ 0.8
PTPDC1A2A3K4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPDC1A2A3K4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.02■□□□□ 0.8
PTPDC1A2A3K4 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.02■□□□□ 0.8
PTPDC1A2A3K4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPDC1A2A3K4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PTPDC1A2A3K4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PTPDC1A2A3K4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PTPDC1A2A3K4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PTPDC1A2A3K4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PTPDC1A2A3K4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PTPDC1A2A3K4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PTPDC1A2A3K4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PTPDC1A2A3K4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PTPDC1A2A3K4 AC078925.2-201ENST00000624013 1973 ntBASIC20.01■□□□□ 0.79
PTPDC1A2A3K4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PTPDC1A2A3K4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.01■□□□□ 0.79
PTPDC1A2A3K4 AC006504.4-201ENST00000592118 1568 ntBASIC20.01■□□□□ 0.79
PTPDC1A2A3K4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPDC1A2A3K4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
PTPDC1A2A3K4 ELK2BP-201ENST00000415014 1224 ntBASIC20.01■□□□□ 0.79
PTPDC1A2A3K4 LINC00982-205ENST00000420957 435 ntBASIC20.01■□□□□ 0.79
PTPDC1A2A3K4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.01■□□□□ 0.79
PTPDC1A2A3K4 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.01■□□□□ 0.79
PTPDC1A2A3K4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.01■□□□□ 0.79
PTPDC1A2A3K4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.01■□□□□ 0.79
PTPDC1A2A3K4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.01■□□□□ 0.79
PTPDC1A2A3K4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PTPDC1A2A3K4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.01■□□□□ 0.79
PTPDC1A2A3K4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.01■□□□□ 0.79
PTPDC1A2A3K4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.01■□□□□ 0.79
PTPDC1A2A3K4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PTPDC1A2A3K4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.01■□□□□ 0.79
PTPDC1A2A3K4 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC20.01■□□□□ 0.79
PTPDC1A2A3K4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PTPDC1A2A3K4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.01■□□□□ 0.79
PTPDC1A2A3K4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms