Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SMIM28A0A1B0GU29 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.17■□□□□ 0.5
SMIM28A0A1B0GU29 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.17■□□□□ 0.5
SMIM28A0A1B0GU29 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.17■□□□□ 0.5
SMIM28A0A1B0GU29 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM28A0A1B0GU29 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SMIM28A0A1B0GU29 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM28A0A1B0GU29 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM28A0A1B0GU29 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.17■□□□□ 0.5
SMIM28A0A1B0GU29 AC005332.8-201ENST00000622750 2735 ntBASIC18.17■□□□□ 0.5
SMIM28A0A1B0GU29 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SMIM28A0A1B0GU29 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM28A0A1B0GU29 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM28A0A1B0GU29 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM28A0A1B0GU29 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SMIM28A0A1B0GU29 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM28A0A1B0GU29 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SMIM28A0A1B0GU29 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM28A0A1B0GU29 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM28A0A1B0GU29 AC004461.1-201ENST00000412461 403 ntBASIC18.17■□□□□ 0.5
SMIM28A0A1B0GU29 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.17■□□□□ 0.5
SMIM28A0A1B0GU29 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.17■□□□□ 0.5
SMIM28A0A1B0GU29 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.17■□□□□ 0.5
SMIM28A0A1B0GU29 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.17■□□□□ 0.5
SMIM28A0A1B0GU29 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM28A0A1B0GU29 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM28A0A1B0GU29 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM28A0A1B0GU29 KRT18P28-201ENST00000453838 1332 ntBASIC18.17■□□□□ 0.5
SMIM28A0A1B0GU29 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM28A0A1B0GU29 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM28A0A1B0GU29 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SMIM28A0A1B0GU29 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 RNU1-129P-201ENST00000384064 167 ntBASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 AC092474.2-201ENST00000424288 719 ntBASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 PMS2P2-201ENST00000425039 1128 ntBASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 U1.21-201ENST00000580816 167 ntBASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 AC022145.2-201ENST00000598203 171 ntBASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 AC027612.4-201ENST00000605371 583 ntBASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 AP001350.2-201ENST00000625104 1094 ntBASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM28A0A1B0GU29 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM28A0A1B0GU29 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM28A0A1B0GU29 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM28A0A1B0GU29 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM28A0A1B0GU29 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SMIM28A0A1B0GU29 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM28A0A1B0GU29 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.15■□□□□ 0.5
SMIM28A0A1B0GU29 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.15■□□□□ 0.5
SMIM28A0A1B0GU29 AL645608.8-201ENST00000606034 2086 ntBASIC18.15■□□□□ 0.5
SMIM28A0A1B0GU29 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM28A0A1B0GU29 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM28A0A1B0GU29 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM28A0A1B0GU29 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM28A0A1B0GU29 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM28A0A1B0GU29 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
SMIM28A0A1B0GU29 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.15■□□□□ 0.5
SMIM28A0A1B0GU29 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.15■□□□□ 0.5
SMIM28A0A1B0GU29 FAM86C2P-203ENST00000528684 1004 ntBASIC18.15■□□□□ 0.5
SMIM28A0A1B0GU29 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.15■□□□□ 0.5
SMIM28A0A1B0GU29 AC109635.5-201ENST00000533593 962 ntBASIC18.15■□□□□ 0.5
SMIM28A0A1B0GU29 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SMIM28A0A1B0GU29 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SMIM28A0A1B0GU29 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms