Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-DRB4X5D2U9 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
HLA-DRB4X5D2U9 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 AC116353.5-201ENST00000638148 1699 ntBASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 TLE1-202ENST00000376484 666 ntTSL 3 BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 AL020989.1-201ENST00000422979 469 ntBASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-DRB4X5D2U9 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 FLJ38576-201ENST00000623820 2459 ntBASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 EMD-201ENST00000369835 966 ntTSL 3 BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 SPDYE21P-201ENST00000413323 827 ntBASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 RBM17P3-201ENST00000417687 1192 ntBASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 SIGLEC30P-201ENST00000455569 941 ntBASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 KRT18P31-201ENST00000506277 1292 ntBASIC12.88□□□□□ -0.35
HLA-DRB4X5D2U9 TPM1-218ENST00000559281 851 ntTSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms