Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 HTR7P1-201ENST00000538670 1336 ntBASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC8.79□□□□□ -1
LINC01558Q9Y6Z2 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 REXO1L11P-201ENST00000620964 1927 ntBASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 AP000593.1-201ENST00000393668 712 ntBASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 DUTP2-201ENST00000519164 463 ntBASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 AC124947.2-201ENST00000547118 1133 ntBASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 TSPY26P-201ENST00000476365 1326 ntBASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
LINC01558Q9Y6Z2 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1
LINC01558Q9Y6Z2 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
LINC01558Q9Y6Z2 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC8.77□□□□□ -1
LINC01558Q9Y6Z2 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC8.77□□□□□ -1
LINC01558Q9Y6Z2 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC8.77□□□□□ -1
LINC01558Q9Y6Z2 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
LINC01558Q9Y6Z2 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
LINC01558Q9Y6Z2 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC8.77□□□□□ -1
LINC01558Q9Y6Z2 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC8.77□□□□□ -1
LINC01558Q9Y6Z2 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
LINC01558Q9Y6Z2 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
LINC01558Q9Y6Z2 CYP21A1P-202ENST00000354927 1481 ntBASIC8.77□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms