Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGA1Q9Y5H4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGA1Q9Y5H4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHGA1Q9Y5H4 MIR6080-201ENST00000617359 66 ntBASIC16.33■□□□□ 0.2
PCDHGA1Q9Y5H4 AC008267.7-201ENST00000624570 1194 ntBASIC16.33■□□□□ 0.2
PCDHGA1Q9Y5H4 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGA1Q9Y5H4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA1Q9Y5H4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA1Q9Y5H4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGA1Q9Y5H4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA1Q9Y5H4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA1Q9Y5H4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGA1Q9Y5H4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PCDHGA1Q9Y5H4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA1Q9Y5H4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA1Q9Y5H4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PCDHGA1Q9Y5H4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA1Q9Y5H4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGA1Q9Y5H4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
PCDHGA1Q9Y5H4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA1Q9Y5H4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA1Q9Y5H4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA1Q9Y5H4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA1Q9Y5H4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
PCDHGA1Q9Y5H4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA1Q9Y5H4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA1Q9Y5H4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA1Q9Y5H4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA1Q9Y5H4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA1Q9Y5H4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PCDHGA1Q9Y5H4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA1Q9Y5H4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA1Q9Y5H4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA1Q9Y5H4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA1Q9Y5H4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA1Q9Y5H4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
PCDHGA1Q9Y5H4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA1Q9Y5H4 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.32■□□□□ 0.2
PCDHGA1Q9Y5H4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGA1Q9Y5H4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHGA1Q9Y5H4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA1Q9Y5H4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGA1Q9Y5H4 HLA-J-202ENST00000469281 1241 ntBASIC16.32■□□□□ 0.2
PCDHGA1Q9Y5H4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PCDHGA1Q9Y5H4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA1Q9Y5H4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.32■□□□□ 0.2
PCDHGA1Q9Y5H4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDHGA1Q9Y5H4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA1Q9Y5H4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.32■□□□□ 0.2
PCDHGA1Q9Y5H4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.32■□□□□ 0.2
PCDHGA1Q9Y5H4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PCDHGA1Q9Y5H4 AC104581.1-202ENST00000635932 2618 ntBASIC16.32■□□□□ 0.2
PCDHGA1Q9Y5H4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA1Q9Y5H4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA1Q9Y5H4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA1Q9Y5H4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 MIR346-201ENST00000362234 95 ntBASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 HCG4-201ENST00000418983 998 ntBASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 AC241585.1-201ENST00000433527 519 ntBASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 ALG1L8P-201ENST00000533887 760 ntBASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 MIR3909-201ENST00000579518 119 ntBASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 AC009118.2-201ENST00000613275 655 ntBASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 REXO1L11P-201ENST00000620964 1927 ntBASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA1Q9Y5H4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PCDHGA1Q9Y5H4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA1Q9Y5H4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PCDHGA1Q9Y5H4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms