Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB13Q9Y5F0 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB13Q9Y5F0 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB13Q9Y5F0 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB13Q9Y5F0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB13Q9Y5F0 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB13Q9Y5F0 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB13Q9Y5F0 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB13Q9Y5F0 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB13Q9Y5F0 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB13Q9Y5F0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHB13Q9Y5F0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PCDHB13Q9Y5F0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB13Q9Y5F0 KRT18P27-201ENST00000427733 1299 ntBASIC18.87■□□□□ 0.61
PCDHB13Q9Y5F0 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHB13Q9Y5F0 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB13Q9Y5F0 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB13Q9Y5F0 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHB13Q9Y5F0 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDHB13Q9Y5F0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.87■□□□□ 0.61
PCDHB13Q9Y5F0 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
PCDHB13Q9Y5F0 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB13Q9Y5F0 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHB13Q9Y5F0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.87■□□□□ 0.61
PCDHB13Q9Y5F0 AC105339.3-201ENST00000560043 636 ntBASIC18.87■□□□□ 0.61
PCDHB13Q9Y5F0 AC006504.4-201ENST00000592118 1568 ntBASIC18.87■□□□□ 0.61
PCDHB13Q9Y5F0 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.87■□□□□ 0.61
PCDHB13Q9Y5F0 AC148477.8-201ENST00000624298 468 ntBASIC18.87■□□□□ 0.61
PCDHB13Q9Y5F0 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB13Q9Y5F0 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB13Q9Y5F0 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 AP002414.1-201ENST00000391405 1147 ntBASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 AL662844.1-201ENST00000546340 181 ntBASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 AC004223.2-201ENST00000590309 544 ntBASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 AC009452.1-201ENST00000640823 606 ntBASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB13Q9Y5F0 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 AL121761.2-201ENST00000598007 1648 ntBASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 AC243591.1-201ENST00000452967 1364 ntBASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 AC073621.1-201ENST00000392730 636 ntBASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 PTCHD3P3-201ENST00000403073 906 ntBASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 AC136632.2-201ENST00000512891 861 ntBASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 TERC-201ENST00000602385 541 ntBASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 FAM215A-202ENST00000632077 792 ntBASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 AC009053.2-201ENST00000563701 2365 ntBASIC18.85■□□□□ 0.61
PCDHB13Q9Y5F0 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms