Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LRCH1Q9Y2L9 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
LRCH1Q9Y2L9 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
LRCH1Q9Y2L9 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.27■□□□□ 0.19
LRCH1Q9Y2L9 ALOX12P2-203ENST00000570921 1945 ntBASIC16.27■□□□□ 0.19
LRCH1Q9Y2L9 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.27■□□□□ 0.19
LRCH1Q9Y2L9 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.27■□□□□ 0.19
LRCH1Q9Y2L9 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRCH1Q9Y2L9 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRCH1Q9Y2L9 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.27■□□□□ 0.19
LRCH1Q9Y2L9 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRCH1Q9Y2L9 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 AP002414.2-201ENST00000591780 3365 ntBASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 KRT16P1-201ENST00000399124 1418 ntBASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRCH1Q9Y2L9 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 NORAD-201ENST00000565493 5339 ntBASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 FAM197Y1-201ENST00000421178 764 ntBASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LRCH1Q9Y2L9 AC036111.1-201ENST00000533973 1582 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms