Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CCNL1Q9UK58 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCNL1Q9UK58 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC21.44■■□□□ 1.02
CCNL1Q9UK58 WASH4P-201ENST00000564273 1246 ntBASIC21.44■■□□□ 1.02
CCNL1Q9UK58 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC21.44■■□□□ 1.02
CCNL1Q9UK58 NAA38-206ENST00000576384 424 ntTSL 2 BASIC21.44■■□□□ 1.02
CCNL1Q9UK58 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNL1Q9UK58 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
CCNL1Q9UK58 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNL1Q9UK58 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC21.44■■□□□ 1.02
CCNL1Q9UK58 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CCNL1Q9UK58 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC21.44■■□□□ 1.02
CCNL1Q9UK58 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNL1Q9UK58 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCNL1Q9UK58 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCNL1Q9UK58 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.43■■□□□ 1.02
CCNL1Q9UK58 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCNL1Q9UK58 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CCNL1Q9UK58 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCNL1Q9UK58 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.43■■□□□ 1.02
CCNL1Q9UK58 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCNL1Q9UK58 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCNL1Q9UK58 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCNL1Q9UK58 MIR658-201ENST00000385210 100 ntBASIC21.43■■□□□ 1.02
CCNL1Q9UK58 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC21.43■■□□□ 1.02
CCNL1Q9UK58 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCNL1Q9UK58 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC21.43■■□□□ 1.02
CCNL1Q9UK58 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC21.43■■□□□ 1.02
CCNL1Q9UK58 AC008494.3-201ENST00000606615 944 ntBASIC21.43■■□□□ 1.02
CCNL1Q9UK58 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC21.43■■□□□ 1.02
CCNL1Q9UK58 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC21.43■■□□□ 1.02
CCNL1Q9UK58 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC21.43■■□□□ 1.02
CCNL1Q9UK58 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCNL1Q9UK58 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.43■■□□□ 1.02
CCNL1Q9UK58 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCNL1Q9UK58 FOS-208ENST00000555686 1496 ntTSL 2 BASIC21.43■■□□□ 1.02
CCNL1Q9UK58 EGFEM1P-202ENST00000431685 1563 ntBASIC21.43■■□□□ 1.02
CCNL1Q9UK58 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CCNL1Q9UK58 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCNL1Q9UK58 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCNL1Q9UK58 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CCNL1Q9UK58 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.43■■□□□ 1.02
CCNL1Q9UK58 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCNL1Q9UK58 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCNL1Q9UK58 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCNL1Q9UK58 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCNL1Q9UK58 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
CCNL1Q9UK58 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CCNL1Q9UK58 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
CCNL1Q9UK58 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCNL1Q9UK58 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CCNL1Q9UK58 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC21.42■■□□□ 1.02
CCNL1Q9UK58 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC21.42■■□□□ 1.02
CCNL1Q9UK58 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCNL1Q9UK58 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC21.42■■□□□ 1.02
CCNL1Q9UK58 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC21.42■■□□□ 1.02
CCNL1Q9UK58 AC087499.6-201ENST00000411576 835 ntBASIC21.42■■□□□ 1.02
CCNL1Q9UK58 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CCNL1Q9UK58 AL391825.1-201ENST00000457671 1364 ntBASIC21.42■■□□□ 1.02
CCNL1Q9UK58 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CCNL1Q9UK58 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC21.42■■□□□ 1.02
CCNL1Q9UK58 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC21.42■■□□□ 1.02
CCNL1Q9UK58 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CCNL1Q9UK58 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.42■■□□□ 1.02
CCNL1Q9UK58 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCNL1Q9UK58 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
CCNL1Q9UK58 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.41■■□□□ 1.02
CCNL1Q9UK58 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC21.41■■□□□ 1.02
CCNL1Q9UK58 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC21.41■■□□□ 1.02
CCNL1Q9UK58 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC21.41■■□□□ 1.02
CCNL1Q9UK58 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC21.41■■□□□ 1.02
CCNL1Q9UK58 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCNL1Q9UK58 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC21.41■■□□□ 1.02
CCNL1Q9UK58 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC21.41■■□□□ 1.02
CCNL1Q9UK58 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCNL1Q9UK58 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCNL1Q9UK58 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCNL1Q9UK58 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CCNL1Q9UK58 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCNL1Q9UK58 AC011495.1-201ENST00000498085 584 ntBASIC21.41■■□□□ 1.02
CCNL1Q9UK58 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CCNL1Q9UK58 KRT17P8-201ENST00000540749 863 ntBASIC21.41■■□□□ 1.02
CCNL1Q9UK58 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC21.41■■□□□ 1.02
CCNL1Q9UK58 BANF1P1-201ENST00000553684 263 ntBASIC21.41■■□□□ 1.02
CCNL1Q9UK58 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC21.41■■□□□ 1.02
CCNL1Q9UK58 CHCHD2P3-201ENST00000603038 451 ntBASIC21.41■■□□□ 1.02
CCNL1Q9UK58 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCNL1Q9UK58 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCNL1Q9UK58 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCNL1Q9UK58 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCNL1Q9UK58 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCNL1Q9UK58 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CCNL1Q9UK58 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCNL1Q9UK58 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCNL1Q9UK58 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCNL1Q9UK58 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCNL1Q9UK58 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.4■■□□□ 1.02
CCNL1Q9UK58 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.4■■□□□ 1.02
CCNL1Q9UK58 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
CCNL1Q9UK58 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms