Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 ENSA-206ENST00000361631 725 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 AL020989.1-201ENST00000422979 469 ntBASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 SIGLEC30P-201ENST00000455569 941 ntBASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC00474Q9P2X8 AL355312.1-201ENST00000407115 2176 ntBASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 SIRPAP1-201ENST00000448467 1770 ntBASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 TSPY19P-201ENST00000418461 509 ntBASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 TSPY18P-201ENST00000441642 509 ntBASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 BET1L-206ENST00000486280 665 ntTSL 3 BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 AC091607.1-201ENST00000490318 1060 ntBASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 STK25P1-201ENST00000585406 838 ntBASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 AD001527.2-201ENST00000622994 785 ntBASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 AL139288.1-201ENST00000623748 933 ntBASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 AC073592.5-201ENST00000624854 528 ntBASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 AL049757.1-201ENST00000616842 1596 ntBASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC11.18□□□□□ -0.62
LINC00474Q9P2X8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms