Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.83■□□□□ 0.28
MKS1Q9NXB0 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.83■□□□□ 0.28
MKS1Q9NXB0 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.83■□□□□ 0.28
MKS1Q9NXB0 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MKS1Q9NXB0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.83■□□□□ 0.28
MKS1Q9NXB0 AC011498.5-201ENST00000592027 486 ntBASIC16.83■□□□□ 0.28
MKS1Q9NXB0 AC024909.3-201ENST00000611513 2257 ntBASIC16.83■□□□□ 0.28
MKS1Q9NXB0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.83■□□□□ 0.28
MKS1Q9NXB0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.83■□□□□ 0.28
MKS1Q9NXB0 AC006277.1-201ENST00000624348 1610 ntBASIC16.83■□□□□ 0.28
MKS1Q9NXB0 AC148477.5-201ENST00000625164 1645 ntBASIC16.83■□□□□ 0.28
MKS1Q9NXB0 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MKS1Q9NXB0 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MKS1Q9NXB0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MKS1Q9NXB0 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
MKS1Q9NXB0 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MKS1Q9NXB0 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MKS1Q9NXB0 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
MKS1Q9NXB0 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.82■□□□□ 0.28
MKS1Q9NXB0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MKS1Q9NXB0 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
MKS1Q9NXB0 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MKS1Q9NXB0 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MKS1Q9NXB0 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MKS1Q9NXB0 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MKS1Q9NXB0 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MKS1Q9NXB0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MKS1Q9NXB0 GGT3P-204ENST00000453783 1664 ntBASIC16.82■□□□□ 0.28
MKS1Q9NXB0 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MKS1Q9NXB0 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MKS1Q9NXB0 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MKS1Q9NXB0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MKS1Q9NXB0 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MKS1Q9NXB0 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
MKS1Q9NXB0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.82■□□□□ 0.28
MKS1Q9NXB0 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MKS1Q9NXB0 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MKS1Q9NXB0 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.82■□□□□ 0.28
MKS1Q9NXB0 AL671277.2-201ENST00000458060 996 ntBASIC16.82■□□□□ 0.28
MKS1Q9NXB0 VENTXP7-201ENST00000475503 772 ntBASIC16.82■□□□□ 0.28
MKS1Q9NXB0 AC091607.1-201ENST00000490318 1060 ntBASIC16.82■□□□□ 0.28
MKS1Q9NXB0 AC063952.2-201ENST00000498792 1227 ntBASIC16.82■□□□□ 0.28
MKS1Q9NXB0 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MKS1Q9NXB0 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.82■□□□□ 0.28
MKS1Q9NXB0 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.82■□□□□ 0.28
MKS1Q9NXB0 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.82■□□□□ 0.28
MKS1Q9NXB0 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MKS1Q9NXB0 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
MKS1Q9NXB0 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MKS1Q9NXB0 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
MKS1Q9NXB0 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MKS1Q9NXB0 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MKS1Q9NXB0 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.82■□□□□ 0.28
MKS1Q9NXB0 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MKS1Q9NXB0 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MKS1Q9NXB0 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MKS1Q9NXB0 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MKS1Q9NXB0 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
MKS1Q9NXB0 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MKS1Q9NXB0 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MKS1Q9NXB0 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MKS1Q9NXB0 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
MKS1Q9NXB0 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.81■□□□□ 0.28
MKS1Q9NXB0 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
MKS1Q9NXB0 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.81■□□□□ 0.28
MKS1Q9NXB0 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.81■□□□□ 0.28
MKS1Q9NXB0 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MKS1Q9NXB0 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MKS1Q9NXB0 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MKS1Q9NXB0 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MKS1Q9NXB0 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MKS1Q9NXB0 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
MKS1Q9NXB0 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MKS1Q9NXB0 AL020989.1-201ENST00000422979 469 ntBASIC16.81■□□□□ 0.28
MKS1Q9NXB0 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.81■□□□□ 0.28
MKS1Q9NXB0 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.81■□□□□ 0.28
MKS1Q9NXB0 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
MKS1Q9NXB0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.81■□□□□ 0.28
MKS1Q9NXB0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.81■□□□□ 0.28
MKS1Q9NXB0 AC133561.5-201ENST00000635547 218 ntBASIC16.81■□□□□ 0.28
MKS1Q9NXB0 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MKS1Q9NXB0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MKS1Q9NXB0 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.81■□□□□ 0.28
MKS1Q9NXB0 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MKS1Q9NXB0 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
MKS1Q9NXB0 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MKS1Q9NXB0 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.81■□□□□ 0.28
MKS1Q9NXB0 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MKS1Q9NXB0 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MKS1Q9NXB0 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
MKS1Q9NXB0 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MKS1Q9NXB0 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
MKS1Q9NXB0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MKS1Q9NXB0 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MKS1Q9NXB0 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MKS1Q9NXB0 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MKS1Q9NXB0 TP73-AS1-210ENST00000637775 1455 ntBASIC16.8■□□□□ 0.28
MKS1Q9NXB0 INTS4P1-201ENST00000438455 1935 ntBASIC16.8■□□□□ 0.28
MKS1Q9NXB0 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MKS1Q9NXB0 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms