Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CISHQ9NSE2 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CISHQ9NSE2 KRT8P49-201ENST00000604166 1432 ntBASIC18.15■□□□□ 0.5
CISHQ9NSE2 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.15■□□□□ 0.5
CISHQ9NSE2 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CISHQ9NSE2 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CISHQ9NSE2 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CISHQ9NSE2 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CISHQ9NSE2 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CISHQ9NSE2 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.15■□□□□ 0.5
CISHQ9NSE2 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.15■□□□□ 0.5
CISHQ9NSE2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.15■□□□□ 0.5
CISHQ9NSE2 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.15■□□□□ 0.5
CISHQ9NSE2 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.15■□□□□ 0.5
CISHQ9NSE2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CISHQ9NSE2 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CISHQ9NSE2 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CISHQ9NSE2 Z83851.2-201ENST00000609564 659 ntBASIC18.15■□□□□ 0.5
CISHQ9NSE2 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
CISHQ9NSE2 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CISHQ9NSE2 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CISHQ9NSE2 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CISHQ9NSE2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CISHQ9NSE2 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CISHQ9NSE2 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.15■□□□□ 0.5
CISHQ9NSE2 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CISHQ9NSE2 AC106886.4-201ENST00000623557 2502 ntBASIC18.15■□□□□ 0.5
CISHQ9NSE2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CISHQ9NSE2 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CISHQ9NSE2 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CISHQ9NSE2 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CISHQ9NSE2 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
CISHQ9NSE2 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CISHQ9NSE2 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.14■□□□□ 0.5
CISHQ9NSE2 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CISHQ9NSE2 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CISHQ9NSE2 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CISHQ9NSE2 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CISHQ9NSE2 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CISHQ9NSE2 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CISHQ9NSE2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
CISHQ9NSE2 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CISHQ9NSE2 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CISHQ9NSE2 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.14■□□□□ 0.49
CISHQ9NSE2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CISHQ9NSE2 AC107918.2-201ENST00000530817 355 ntBASIC18.14■□□□□ 0.49
CISHQ9NSE2 AC145285.3-201ENST00000564603 959 ntBASIC18.14■□□□□ 0.49
CISHQ9NSE2 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CISHQ9NSE2 BX640515.1-201ENST00000617215 977 ntBASIC18.14■□□□□ 0.49
CISHQ9NSE2 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.14■□□□□ 0.49
CISHQ9NSE2 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CISHQ9NSE2 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CISHQ9NSE2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
CISHQ9NSE2 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.14■□□□□ 0.49
CISHQ9NSE2 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.14■□□□□ 0.49
CISHQ9NSE2 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CISHQ9NSE2 TOP3BP1-201ENST00000420768 1380 ntBASIC18.14■□□□□ 0.49
CISHQ9NSE2 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.14■□□□□ 0.49
CISHQ9NSE2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CISHQ9NSE2 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.14■□□□□ 0.49
CISHQ9NSE2 AC104109.2-201ENST00000602919 1418 ntBASIC18.14■□□□□ 0.49
CISHQ9NSE2 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CISHQ9NSE2 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CISHQ9NSE2 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.13■□□□□ 0.49
CISHQ9NSE2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.13■□□□□ 0.49
CISHQ9NSE2 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CISHQ9NSE2 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CISHQ9NSE2 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CISHQ9NSE2 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.13■□□□□ 0.49
CISHQ9NSE2 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CISHQ9NSE2 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CISHQ9NSE2 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.13■□□□□ 0.49
CISHQ9NSE2 PRORSD1P-202ENST00000563365 2154 ntBASIC18.13■□□□□ 0.49
CISHQ9NSE2 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CISHQ9NSE2 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CISHQ9NSE2 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CISHQ9NSE2 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CISHQ9NSE2 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CISHQ9NSE2 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CISHQ9NSE2 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.13■□□□□ 0.49
CISHQ9NSE2 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.13■□□□□ 0.49
CISHQ9NSE2 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.13■□□□□ 0.49
CISHQ9NSE2 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CISHQ9NSE2 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.13■□□□□ 0.49
CISHQ9NSE2 PRSS29P-201ENST00000440800 595 ntBASIC18.13■□□□□ 0.49
CISHQ9NSE2 RPL13AP23-201ENST00000480739 586 ntBASIC18.13■□□□□ 0.49
CISHQ9NSE2 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CISHQ9NSE2 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.13■□□□□ 0.49
CISHQ9NSE2 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.13■□□□□ 0.49
CISHQ9NSE2 MIR4751-201ENST00000578027 74 ntBASIC18.13■□□□□ 0.49
CISHQ9NSE2 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.13■□□□□ 0.49
CISHQ9NSE2 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
CISHQ9NSE2 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CISHQ9NSE2 AC120114.3-201ENST00000611923 658 ntBASIC18.13■□□□□ 0.49
CISHQ9NSE2 AC010654.1-201ENST00000615722 808 ntBASIC18.13■□□□□ 0.49
CISHQ9NSE2 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CISHQ9NSE2 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.13■□□□□ 0.49
CISHQ9NSE2 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CISHQ9NSE2 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.13■□□□□ 0.49
CISHQ9NSE2 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms