Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM7Q9NR12 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM7Q9NR12 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM7Q9NR12 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM7Q9NR12 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM7Q9NR12 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.95■□□□□ 0.62
PDLIM7Q9NR12 AC139713.2-201ENST00000641328 2723 ntBASIC18.94■□□□□ 0.62
PDLIM7Q9NR12 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PDLIM7Q9NR12 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.94■□□□□ 0.62
PDLIM7Q9NR12 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDLIM7Q9NR12 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDLIM7Q9NR12 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDLIM7Q9NR12 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDLIM7Q9NR12 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.94■□□□□ 0.62
PDLIM7Q9NR12 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PDLIM7Q9NR12 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDLIM7Q9NR12 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDLIM7Q9NR12 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDLIM7Q9NR12 OR8S1-201ENST00000310194 1080 ntBASIC18.94■□□□□ 0.62
PDLIM7Q9NR12 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.94■□□□□ 0.62
PDLIM7Q9NR12 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDLIM7Q9NR12 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.94■□□□□ 0.62
PDLIM7Q9NR12 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.94■□□□□ 0.62
PDLIM7Q9NR12 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.94■□□□□ 0.62
PDLIM7Q9NR12 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.94■□□□□ 0.62
PDLIM7Q9NR12 RARRES2P8-201ENST00000566335 367 ntBASIC18.94■□□□□ 0.62
PDLIM7Q9NR12 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.94■□□□□ 0.62
PDLIM7Q9NR12 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDLIM7Q9NR12 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDLIM7Q9NR12 AC129492.6-201ENST00000611383 1305 ntBASIC18.94■□□□□ 0.62
PDLIM7Q9NR12 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PDLIM7Q9NR12 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDLIM7Q9NR12 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.94■□□□□ 0.62
PDLIM7Q9NR12 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM7Q9NR12 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM7Q9NR12 AC008677.1-201ENST00000519230 1561 ntBASIC18.93■□□□□ 0.62
PDLIM7Q9NR12 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
PDLIM7Q9NR12 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.93■□□□□ 0.62
PDLIM7Q9NR12 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM7Q9NR12 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
PDLIM7Q9NR12 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM7Q9NR12 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.93■□□□□ 0.62
PDLIM7Q9NR12 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.93■□□□□ 0.62
PDLIM7Q9NR12 HLA-V-201ENST00000429037 534 ntBASIC18.93■□□□□ 0.62
PDLIM7Q9NR12 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM7Q9NR12 SPCS2P4-201ENST00000436160 681 ntBASIC18.93■□□□□ 0.62
PDLIM7Q9NR12 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.93■□□□□ 0.62
PDLIM7Q9NR12 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.93■□□□□ 0.62
PDLIM7Q9NR12 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.93■□□□□ 0.62
PDLIM7Q9NR12 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.93■□□□□ 0.62
PDLIM7Q9NR12 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM7Q9NR12 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.93■□□□□ 0.62
PDLIM7Q9NR12 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.93■□□□□ 0.62
PDLIM7Q9NR12 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.93■□□□□ 0.62
PDLIM7Q9NR12 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PDLIM7Q9NR12 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.93■□□□□ 0.62
PDLIM7Q9NR12 AL645728.2-201ENST00000641974 660 ntBASIC18.93■□□□□ 0.62
PDLIM7Q9NR12 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.93■□□□□ 0.62
PDLIM7Q9NR12 LINC02012-201ENST00000608206 1725 ntBASIC18.93■□□□□ 0.62
PDLIM7Q9NR12 FRMD8P1-201ENST00000440433 1524 ntBASIC18.93■□□□□ 0.62
PDLIM7Q9NR12 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.93■□□□□ 0.62
PDLIM7Q9NR12 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM7Q9NR12 AKAP8P1-201ENST00000434743 1349 ntBASIC18.93■□□□□ 0.62
PDLIM7Q9NR12 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDLIM7Q9NR12 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDLIM7Q9NR12 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDLIM7Q9NR12 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.92■□□□□ 0.62
PDLIM7Q9NR12 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDLIM7Q9NR12 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PDLIM7Q9NR12 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDLIM7Q9NR12 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.92■□□□□ 0.62
PDLIM7Q9NR12 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
PDLIM7Q9NR12 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PDLIM7Q9NR12 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDLIM7Q9NR12 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDLIM7Q9NR12 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDLIM7Q9NR12 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDLIM7Q9NR12 SPDYE14P-201ENST00000442619 822 ntBASIC18.92■□□□□ 0.62
PDLIM7Q9NR12 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.92■□□□□ 0.62
PDLIM7Q9NR12 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.92■□□□□ 0.62
PDLIM7Q9NR12 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.92■□□□□ 0.62
PDLIM7Q9NR12 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.92■□□□□ 0.62
PDLIM7Q9NR12 AC026150.2-201ENST00000564693 1156 ntBASIC18.92■□□□□ 0.62
PDLIM7Q9NR12 AL158211.3-201ENST00000607385 239 ntBASIC18.92■□□□□ 0.62
PDLIM7Q9NR12 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.92■□□□□ 0.62
PDLIM7Q9NR12 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.92■□□□□ 0.62
PDLIM7Q9NR12 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
PDLIM7Q9NR12 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDLIM7Q9NR12 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDLIM7Q9NR12 AL645608.8-201ENST00000606034 2086 ntBASIC18.92■□□□□ 0.62
PDLIM7Q9NR12 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
PDLIM7Q9NR12 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDLIM7Q9NR12 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PDLIM7Q9NR12 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.92■□□□□ 0.62
PDLIM7Q9NR12 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PDLIM7Q9NR12 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
PDLIM7Q9NR12 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDLIM7Q9NR12 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.92■□□□□ 0.62
PDLIM7Q9NR12 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.91■□□□□ 0.62
PDLIM7Q9NR12 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms