Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VTA1Q9NP79 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VTA1Q9NP79 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
VTA1Q9NP79 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
VTA1Q9NP79 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.94■□□□□ 0.62
VTA1Q9NP79 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.94■□□□□ 0.62
VTA1Q9NP79 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.94■□□□□ 0.62
VTA1Q9NP79 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VTA1Q9NP79 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.94■□□□□ 0.62
VTA1Q9NP79 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VTA1Q9NP79 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
VTA1Q9NP79 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VTA1Q9NP79 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VTA1Q9NP79 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VTA1Q9NP79 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.94■□□□□ 0.62
VTA1Q9NP79 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.94■□□□□ 0.62
VTA1Q9NP79 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.94■□□□□ 0.62
VTA1Q9NP79 MIR4492-201ENST00000581627 80 ntBASIC18.94■□□□□ 0.62
VTA1Q9NP79 AC138761.1-201ENST00000584393 385 ntBASIC18.94■□□□□ 0.62
VTA1Q9NP79 CYP2A7P1-201ENST00000595391 815 ntBASIC18.94■□□□□ 0.62
VTA1Q9NP79 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VTA1Q9NP79 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.94■□□□□ 0.62
VTA1Q9NP79 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VTA1Q9NP79 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
VTA1Q9NP79 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.94■□□□□ 0.62
VTA1Q9NP79 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VTA1Q9NP79 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
VTA1Q9NP79 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
VTA1Q9NP79 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VTA1Q9NP79 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VTA1Q9NP79 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VTA1Q9NP79 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VTA1Q9NP79 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.94■□□□□ 0.62
VTA1Q9NP79 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VTA1Q9NP79 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.93■□□□□ 0.62
VTA1Q9NP79 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VTA1Q9NP79 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VTA1Q9NP79 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VTA1Q9NP79 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VTA1Q9NP79 NOC2LP1-202ENST00000452600 2235 ntBASIC18.93■□□□□ 0.62
VTA1Q9NP79 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.93■□□□□ 0.62
VTA1Q9NP79 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VTA1Q9NP79 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
VTA1Q9NP79 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VTA1Q9NP79 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VTA1Q9NP79 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
VTA1Q9NP79 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
VTA1Q9NP79 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.93■□□□□ 0.62
VTA1Q9NP79 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.93■□□□□ 0.62
VTA1Q9NP79 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.93■□□□□ 0.62
VTA1Q9NP79 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VTA1Q9NP79 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.93■□□□□ 0.62
VTA1Q9NP79 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.93■□□□□ 0.62
VTA1Q9NP79 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VTA1Q9NP79 AC021097.1-201ENST00000607902 574 ntBASIC18.93■□□□□ 0.62
VTA1Q9NP79 MIR6080-201ENST00000617359 66 ntBASIC18.93■□□□□ 0.62
VTA1Q9NP79 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VTA1Q9NP79 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.93■□□□□ 0.62
VTA1Q9NP79 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.93■□□□□ 0.62
VTA1Q9NP79 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
VTA1Q9NP79 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
VTA1Q9NP79 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VTA1Q9NP79 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VTA1Q9NP79 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.93■□□□□ 0.62
VTA1Q9NP79 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VTA1Q9NP79 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VTA1Q9NP79 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VTA1Q9NP79 FO538757.1-201ENST00000623083 1397 ntBASIC18.93■□□□□ 0.62
VTA1Q9NP79 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VTA1Q9NP79 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
VTA1Q9NP79 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.92■□□□□ 0.62
VTA1Q9NP79 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
VTA1Q9NP79 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VTA1Q9NP79 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VTA1Q9NP79 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
VTA1Q9NP79 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VTA1Q9NP79 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VTA1Q9NP79 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VTA1Q9NP79 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
VTA1Q9NP79 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.92■□□□□ 0.62
VTA1Q9NP79 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VTA1Q9NP79 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.92■□□□□ 0.62
VTA1Q9NP79 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.92■□□□□ 0.62
VTA1Q9NP79 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.92■□□□□ 0.62
VTA1Q9NP79 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.92■□□□□ 0.62
VTA1Q9NP79 AL158211.3-201ENST00000607385 239 ntBASIC18.92■□□□□ 0.62
VTA1Q9NP79 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.92■□□□□ 0.62
VTA1Q9NP79 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VTA1Q9NP79 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VTA1Q9NP79 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
VTA1Q9NP79 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
VTA1Q9NP79 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.92■□□□□ 0.62
VTA1Q9NP79 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VTA1Q9NP79 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
VTA1Q9NP79 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.92■□□□□ 0.62
VTA1Q9NP79 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
VTA1Q9NP79 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VTA1Q9NP79 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
VTA1Q9NP79 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VTA1Q9NP79 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms