Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.61■□□□□ 0.09
CHD8Q9HCK8 AL022328.1-201ENST00000610050 478 ntBASIC15.61■□□□□ 0.09
CHD8Q9HCK8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC15.61■□□□□ 0.09
CHD8Q9HCK8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CHD8Q9HCK8 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHD8Q9HCK8 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.6■□□□□ 0.09
CHD8Q9HCK8 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.6■□□□□ 0.09
CHD8Q9HCK8 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHD8Q9HCK8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHD8Q9HCK8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CHD8Q9HCK8 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.6■□□□□ 0.09
CHD8Q9HCK8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHD8Q9HCK8 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CHD8Q9HCK8 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.6■□□□□ 0.09
CHD8Q9HCK8 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CHD8Q9HCK8 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC15.6■□□□□ 0.09
CHD8Q9HCK8 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.6■□□□□ 0.09
CHD8Q9HCK8 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.6■□□□□ 0.09
CHD8Q9HCK8 AL033527.5-202ENST00000641632 1098 ntBASIC15.6■□□□□ 0.09
CHD8Q9HCK8 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC15.6■□□□□ 0.09
CHD8Q9HCK8 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHD8Q9HCK8 AL353732.1-201ENST00000569618 1459 ntBASIC15.6■□□□□ 0.09
CHD8Q9HCK8 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15.6■□□□□ 0.09
CHD8Q9HCK8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHD8Q9HCK8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHD8Q9HCK8 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC15.6■□□□□ 0.09
CHD8Q9HCK8 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHD8Q9HCK8 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.6■□□□□ 0.09
CHD8Q9HCK8 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CHD8Q9HCK8 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHD8Q9HCK8 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CHD8Q9HCK8 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC15.6■□□□□ 0.09
CHD8Q9HCK8 SERBP1P3-201ENST00000459980 809 ntBASIC15.6■□□□□ 0.09
CHD8Q9HCK8 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.6■□□□□ 0.09
CHD8Q9HCK8 SDHAP3-202ENST00000515467 728 ntBASIC15.6■□□□□ 0.09
CHD8Q9HCK8 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.6■□□□□ 0.09
CHD8Q9HCK8 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC15.6■□□□□ 0.09
CHD8Q9HCK8 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.6■□□□□ 0.09
CHD8Q9HCK8 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHD8Q9HCK8 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CHD8Q9HCK8 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHD8Q9HCK8 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CHD8Q9HCK8 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CHD8Q9HCK8 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHD8Q9HCK8 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC15.59■□□□□ 0.09
CHD8Q9HCK8 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CHD8Q9HCK8 AC138028.6-201ENST00000616106 1482 ntBASIC15.59■□□□□ 0.09
CHD8Q9HCK8 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CHD8Q9HCK8 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.59■□□□□ 0.09
CHD8Q9HCK8 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHD8Q9HCK8 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHD8Q9HCK8 AL662890.1-201ENST00000396818 632 ntBASIC15.59■□□□□ 0.09
CHD8Q9HCK8 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.59■□□□□ 0.09
CHD8Q9HCK8 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHD8Q9HCK8 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.59■□□□□ 0.09
CHD8Q9HCK8 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.59■□□□□ 0.09
CHD8Q9HCK8 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CHD8Q9HCK8 FLJ13224-201ENST00000313737 1514 ntBASIC15.59■□□□□ 0.09
CHD8Q9HCK8 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHD8Q9HCK8 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CHD8Q9HCK8 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC15.59■□□□□ 0.09
CHD8Q9HCK8 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.59■□□□□ 0.09
CHD8Q9HCK8 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHD8Q9HCK8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CHD8Q9HCK8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHD8Q9HCK8 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHD8Q9HCK8 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CHD8Q9HCK8 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.59■□□□□ 0.09
CHD8Q9HCK8 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CHD8Q9HCK8 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC15.59■□□□□ 0.09
CHD8Q9HCK8 AL589987.1-201ENST00000453380 819 ntBASIC15.59■□□□□ 0.09
CHD8Q9HCK8 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
CHD8Q9HCK8 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.59■□□□□ 0.09
CHD8Q9HCK8 AL512361.1-201ENST00000554200 418 ntBASIC15.59■□□□□ 0.09
CHD8Q9HCK8 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.59■□□□□ 0.09
CHD8Q9HCK8 ANO7L1-203ENST00000602586 1720 ntBASIC15.59■□□□□ 0.09
CHD8Q9HCK8 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CHD8Q9HCK8 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CHD8Q9HCK8 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CHD8Q9HCK8 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CHD8Q9HCK8 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.58■□□□□ 0.09
CHD8Q9HCK8 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CHD8Q9HCK8 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.58■□□□□ 0.09
CHD8Q9HCK8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
CHD8Q9HCK8 MIR33B-201ENST00000385104 96 ntBASIC15.58■□□□□ 0.09
CHD8Q9HCK8 FTLP1-201ENST00000449155 526 ntBASIC15.58■□□□□ 0.09
CHD8Q9HCK8 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.58■□□□□ 0.09
CHD8Q9HCK8 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
CHD8Q9HCK8 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC15.58■□□□□ 0.09
CHD8Q9HCK8 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.58■□□□□ 0.09
CHD8Q9HCK8 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.58■□□□□ 0.09
CHD8Q9HCK8 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.58■□□□□ 0.08
CHD8Q9HCK8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHD8Q9HCK8 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHD8Q9HCK8 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CHD8Q9HCK8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHD8Q9HCK8 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CHD8Q9HCK8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHD8Q9HCK8 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHD8Q9HCK8 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms