Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLK4Q9HAZ1 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLK4Q9HAZ1 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.66■□□□□ 0.26
CLK4Q9HAZ1 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLK4Q9HAZ1 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLK4Q9HAZ1 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLK4Q9HAZ1 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.66■□□□□ 0.26
CLK4Q9HAZ1 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLK4Q9HAZ1 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLK4Q9HAZ1 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.66■□□□□ 0.26
CLK4Q9HAZ1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLK4Q9HAZ1 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.66■□□□□ 0.26
CLK4Q9HAZ1 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.66■□□□□ 0.26
CLK4Q9HAZ1 AC132008.2-207ENST00000454517 770 ntBASIC16.66■□□□□ 0.26
CLK4Q9HAZ1 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLK4Q9HAZ1 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.66■□□□□ 0.26
CLK4Q9HAZ1 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.66■□□□□ 0.26
CLK4Q9HAZ1 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CLK4Q9HAZ1 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.66■□□□□ 0.26
CLK4Q9HAZ1 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLK4Q9HAZ1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.66■□□□□ 0.26
CLK4Q9HAZ1 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.66■□□□□ 0.26
CLK4Q9HAZ1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.66■□□□□ 0.26
CLK4Q9HAZ1 REXO1L6P-202ENST00000619970 1078 ntBASIC16.66■□□□□ 0.26
CLK4Q9HAZ1 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
CLK4Q9HAZ1 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLK4Q9HAZ1 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
CLK4Q9HAZ1 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLK4Q9HAZ1 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.66■□□□□ 0.26
CLK4Q9HAZ1 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLK4Q9HAZ1 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
CLK4Q9HAZ1 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CLK4Q9HAZ1 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 AL049757.1-201ENST00000616842 1596 ntBASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 AL603756.1-201ENST00000606511 2163 ntBASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CLK4Q9HAZ1 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.26
CLK4Q9HAZ1 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
CLK4Q9HAZ1 PMPCAP1-201ENST00000508114 1576 ntBASIC16.64■□□□□ 0.25
CLK4Q9HAZ1 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLK4Q9HAZ1 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLK4Q9HAZ1 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLK4Q9HAZ1 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLK4Q9HAZ1 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLK4Q9HAZ1 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLK4Q9HAZ1 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLK4Q9HAZ1 AP005117.1-201ENST00000584346 1413 ntBASIC16.64■□□□□ 0.25
CLK4Q9HAZ1 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLK4Q9HAZ1 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLK4Q9HAZ1 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLK4Q9HAZ1 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLK4Q9HAZ1 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLK4Q9HAZ1 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.64■□□□□ 0.25
CLK4Q9HAZ1 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLK4Q9HAZ1 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.64■□□□□ 0.25
CLK4Q9HAZ1 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CLK4Q9HAZ1 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.64■□□□□ 0.25
CLK4Q9HAZ1 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CLK4Q9HAZ1 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.64■□□□□ 0.25
CLK4Q9HAZ1 SAPCD2P3-201ENST00000455031 850 ntBASIC16.64■□□□□ 0.25
CLK4Q9HAZ1 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
CLK4Q9HAZ1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms