Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.82■□□□□ 0.76
SH2D4AQ9H788 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SH2D4AQ9H788 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SH2D4AQ9H788 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SH2D4AQ9H788 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SH2D4AQ9H788 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SH2D4AQ9H788 AC012569.1-201ENST00000591191 1524 ntBASIC19.81■□□□□ 0.76
SH2D4AQ9H788 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.81■□□□□ 0.76
SH2D4AQ9H788 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SH2D4AQ9H788 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SH2D4AQ9H788 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SH2D4AQ9H788 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SH2D4AQ9H788 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
SH2D4AQ9H788 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SH2D4AQ9H788 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.81■□□□□ 0.76
SH2D4AQ9H788 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SH2D4AQ9H788 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SH2D4AQ9H788 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SH2D4AQ9H788 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SH2D4AQ9H788 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SH2D4AQ9H788 HCG4-201ENST00000418983 998 ntBASIC19.81■□□□□ 0.76
SH2D4AQ9H788 AL671277.1-201ENST00000429656 993 ntBASIC19.81■□□□□ 0.76
SH2D4AQ9H788 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.81■□□□□ 0.76
SH2D4AQ9H788 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.81■□□□□ 0.76
SH2D4AQ9H788 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.81■□□□□ 0.76
SH2D4AQ9H788 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.81■□□□□ 0.76
SH2D4AQ9H788 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SH2D4AQ9H788 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.81■□□□□ 0.76
SH2D4AQ9H788 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.81■□□□□ 0.76
SH2D4AQ9H788 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SH2D4AQ9H788 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SH2D4AQ9H788 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SH2D4AQ9H788 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.81■□□□□ 0.76
SH2D4AQ9H788 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SH2D4AQ9H788 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
SH2D4AQ9H788 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SH2D4AQ9H788 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.81■□□□□ 0.76
SH2D4AQ9H788 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SH2D4AQ9H788 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.8■□□□□ 0.76
SH2D4AQ9H788 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
SH2D4AQ9H788 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.8■□□□□ 0.76
SH2D4AQ9H788 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH2D4AQ9H788 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH2D4AQ9H788 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH2D4AQ9H788 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH2D4AQ9H788 AC093525.9-201ENST00000624961 1746 ntBASIC19.8■□□□□ 0.76
SH2D4AQ9H788 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
SH2D4AQ9H788 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH2D4AQ9H788 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH2D4AQ9H788 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SH2D4AQ9H788 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.8■□□□□ 0.76
SH2D4AQ9H788 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.8■□□□□ 0.76
SH2D4AQ9H788 TIMM8BP1-201ENST00000452384 211 ntBASIC19.8■□□□□ 0.76
SH2D4AQ9H788 CYMP-203ENST00000474680 1263 ntBASIC19.8■□□□□ 0.76
SH2D4AQ9H788 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.8■□□□□ 0.76
SH2D4AQ9H788 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SH2D4AQ9H788 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
SH2D4AQ9H788 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH2D4AQ9H788 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH2D4AQ9H788 AC091167.2-201ENST00000579581 588 ntBASIC19.8■□□□□ 0.76
SH2D4AQ9H788 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SH2D4AQ9H788 AC099522.2-201ENST00000607001 744 ntBASIC19.8■□□□□ 0.76
SH2D4AQ9H788 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH2D4AQ9H788 AL161645.1-201ENST00000622716 1255 ntBASIC19.8■□□□□ 0.76
SH2D4AQ9H788 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH2D4AQ9H788 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH2D4AQ9H788 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH2D4AQ9H788 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SH2D4AQ9H788 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SH2D4AQ9H788 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.8■□□□□ 0.76
SH2D4AQ9H788 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH2D4AQ9H788 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SH2D4AQ9H788 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SH2D4AQ9H788 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.8■□□□□ 0.76
SH2D4AQ9H788 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SH2D4AQ9H788 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.79■□□□□ 0.76
SH2D4AQ9H788 FZD10-202ENST00000539839 3282 ntBASIC19.79■□□□□ 0.76
SH2D4AQ9H788 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SH2D4AQ9H788 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SH2D4AQ9H788 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SH2D4AQ9H788 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
SH2D4AQ9H788 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SH2D4AQ9H788 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.79■□□□□ 0.76
SH2D4AQ9H788 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.79■□□□□ 0.76
SH2D4AQ9H788 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SH2D4AQ9H788 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SH2D4AQ9H788 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
SH2D4AQ9H788 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.79■□□□□ 0.76
SH2D4AQ9H788 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.79■□□□□ 0.76
SH2D4AQ9H788 SPDYE11-202ENST00000450699 704 ntBASIC19.79■□□□□ 0.76
SH2D4AQ9H788 AC023141.5-201ENST00000458585 616 ntBASIC19.79■□□□□ 0.76
SH2D4AQ9H788 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.79■□□□□ 0.76
SH2D4AQ9H788 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.79■□□□□ 0.76
SH2D4AQ9H788 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SH2D4AQ9H788 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.79■□□□□ 0.76
SH2D4AQ9H788 SPDYE9P-201ENST00000570642 692 ntBASIC19.79■□□□□ 0.76
SH2D4AQ9H788 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SH2D4AQ9H788 SPDYE10P-202ENST00000612005 668 ntBASIC19.79■□□□□ 0.76
SH2D4AQ9H788 SPDYE8P-202ENST00000612377 668 ntBASIC19.79■□□□□ 0.76
SH2D4AQ9H788 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms