Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NXF3Q9H4D5 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NXF3Q9H4D5 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NXF3Q9H4D5 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
NXF3Q9H4D5 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.33■□□□□ 0.52
NXF3Q9H4D5 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NXF3Q9H4D5 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NXF3Q9H4D5 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NXF3Q9H4D5 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.33■□□□□ 0.52
NXF3Q9H4D5 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.33■□□□□ 0.52
NXF3Q9H4D5 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NXF3Q9H4D5 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
NXF3Q9H4D5 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NXF3Q9H4D5 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NXF3Q9H4D5 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
NXF3Q9H4D5 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NXF3Q9H4D5 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NXF3Q9H4D5 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.32■□□□□ 0.52
NXF3Q9H4D5 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
NXF3Q9H4D5 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NXF3Q9H4D5 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
NXF3Q9H4D5 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NXF3Q9H4D5 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.32■□□□□ 0.52
NXF3Q9H4D5 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NXF3Q9H4D5 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NXF3Q9H4D5 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NXF3Q9H4D5 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.32■□□□□ 0.52
NXF3Q9H4D5 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.32■□□□□ 0.52
NXF3Q9H4D5 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NXF3Q9H4D5 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.32■□□□□ 0.52
NXF3Q9H4D5 KRT8P48-201ENST00000515599 1220 ntBASIC18.32■□□□□ 0.52
NXF3Q9H4D5 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.32■□□□□ 0.52
NXF3Q9H4D5 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.32■□□□□ 0.52
NXF3Q9H4D5 AC004835.2-201ENST00000603762 682 ntBASIC18.32■□□□□ 0.52
NXF3Q9H4D5 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NXF3Q9H4D5 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NXF3Q9H4D5 KRT8P49-201ENST00000604166 1432 ntBASIC18.32■□□□□ 0.52
NXF3Q9H4D5 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
NXF3Q9H4D5 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NXF3Q9H4D5 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NXF3Q9H4D5 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NXF3Q9H4D5 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NXF3Q9H4D5 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.31■□□□□ 0.52
NXF3Q9H4D5 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.31■□□□□ 0.52
NXF3Q9H4D5 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NXF3Q9H4D5 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NXF3Q9H4D5 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.31■□□□□ 0.52
NXF3Q9H4D5 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NXF3Q9H4D5 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NXF3Q9H4D5 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NXF3Q9H4D5 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NXF3Q9H4D5 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NXF3Q9H4D5 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NXF3Q9H4D5 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.31■□□□□ 0.52
NXF3Q9H4D5 HCG4-201ENST00000418983 998 ntBASIC18.31■□□□□ 0.52
NXF3Q9H4D5 AL671277.1-201ENST00000429656 993 ntBASIC18.31■□□□□ 0.52
NXF3Q9H4D5 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
NXF3Q9H4D5 MPDU1-223ENST00000582151 728 ntBASIC18.31■□□□□ 0.52
NXF3Q9H4D5 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.31■□□□□ 0.52
NXF3Q9H4D5 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.31■□□□□ 0.52
NXF3Q9H4D5 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NXF3Q9H4D5 AL009183.1-201ENST00000603760 355 ntBASIC18.31■□□□□ 0.52
NXF3Q9H4D5 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.31■□□□□ 0.52
NXF3Q9H4D5 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NXF3Q9H4D5 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NXF3Q9H4D5 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NXF3Q9H4D5 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.31■□□□□ 0.52
NXF3Q9H4D5 AC139713.2-201ENST00000641328 2723 ntBASIC18.31■□□□□ 0.52
NXF3Q9H4D5 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NXF3Q9H4D5 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
NXF3Q9H4D5 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NXF3Q9H4D5 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NXF3Q9H4D5 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.31■□□□□ 0.52
NXF3Q9H4D5 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
NXF3Q9H4D5 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.3■□□□□ 0.52
NXF3Q9H4D5 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NXF3Q9H4D5 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.3■□□□□ 0.52
NXF3Q9H4D5 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NXF3Q9H4D5 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NXF3Q9H4D5 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NXF3Q9H4D5 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.3■□□□□ 0.52
NXF3Q9H4D5 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NXF3Q9H4D5 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
NXF3Q9H4D5 AC131009.4-201ENST00000624048 1740 ntBASIC18.3■□□□□ 0.52
NXF3Q9H4D5 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NXF3Q9H4D5 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NXF3Q9H4D5 AL139400.1-201ENST00000366220 510 ntBASIC18.3■□□□□ 0.52
NXF3Q9H4D5 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NXF3Q9H4D5 AC026120.1-201ENST00000611536 926 ntBASIC18.3■□□□□ 0.52
NXF3Q9H4D5 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.3■□□□□ 0.52
NXF3Q9H4D5 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
NXF3Q9H4D5 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
NXF3Q9H4D5 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NXF3Q9H4D5 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NXF3Q9H4D5 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NXF3Q9H4D5 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NXF3Q9H4D5 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NXF3Q9H4D5 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NXF3Q9H4D5 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NXF3Q9H4D5 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms