Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
HIPK3Q9H422 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.51■□□□□ 0.55
HIPK3Q9H422 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIPK3Q9H422 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIPK3Q9H422 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIPK3Q9H422 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.51■□□□□ 0.55
HIPK3Q9H422 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIPK3Q9H422 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HIPK3Q9H422 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIPK3Q9H422 COX5BP8-201ENST00000416911 349 ntBASIC18.51■□□□□ 0.55
HIPK3Q9H422 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.51■□□□□ 0.55
HIPK3Q9H422 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIPK3Q9H422 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.51■□□□□ 0.55
HIPK3Q9H422 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
HIPK3Q9H422 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.51■□□□□ 0.55
HIPK3Q9H422 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.51■□□□□ 0.55
HIPK3Q9H422 MIR3909-201ENST00000579518 119 ntBASIC18.51■□□□□ 0.55
HIPK3Q9H422 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.51■□□□□ 0.55
HIPK3Q9H422 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIPK3Q9H422 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
HIPK3Q9H422 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIPK3Q9H422 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIPK3Q9H422 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIPK3Q9H422 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIPK3Q9H422 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIPK3Q9H422 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.51■□□□□ 0.55
HIPK3Q9H422 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.51■□□□□ 0.55
HIPK3Q9H422 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIPK3Q9H422 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIPK3Q9H422 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIPK3Q9H422 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
HIPK3Q9H422 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
HIPK3Q9H422 AL138781.2-201ENST00000617896 1843 ntBASIC18.51■□□□□ 0.55
HIPK3Q9H422 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIPK3Q9H422 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIPK3Q9H422 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
HIPK3Q9H422 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HIPK3Q9H422 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIPK3Q9H422 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIPK3Q9H422 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIPK3Q9H422 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.5■□□□□ 0.55
HIPK3Q9H422 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIPK3Q9H422 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.5■□□□□ 0.55
HIPK3Q9H422 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.5■□□□□ 0.55
HIPK3Q9H422 TSSK5P-201ENST00000423978 907 ntBASIC18.5■□□□□ 0.55
HIPK3Q9H422 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.5■□□□□ 0.55
HIPK3Q9H422 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.5■□□□□ 0.55
HIPK3Q9H422 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.5■□□□□ 0.55
HIPK3Q9H422 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.5■□□□□ 0.55
HIPK3Q9H422 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIPK3Q9H422 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HIPK3Q9H422 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.5■□□□□ 0.55
HIPK3Q9H422 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.5■□□□□ 0.55
HIPK3Q9H422 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HIPK3Q9H422 AC022144.1-201ENST00000602255 1580 ntBASIC18.5■□□□□ 0.55
HIPK3Q9H422 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIPK3Q9H422 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIPK3Q9H422 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HIPK3Q9H422 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
HIPK3Q9H422 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HIPK3Q9H422 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.49■□□□□ 0.55
HIPK3Q9H422 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
HIPK3Q9H422 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
HIPK3Q9H422 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.49■□□□□ 0.55
HIPK3Q9H422 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
HIPK3Q9H422 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIPK3Q9H422 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
HIPK3Q9H422 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.49■□□□□ 0.55
HIPK3Q9H422 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.49■□□□□ 0.55
HIPK3Q9H422 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HIPK3Q9H422 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.49■□□□□ 0.55
HIPK3Q9H422 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
HIPK3Q9H422 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HIPK3Q9H422 AC091167.2-201ENST00000579581 588 ntBASIC18.49■□□□□ 0.55
HIPK3Q9H422 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.49■□□□□ 0.55
HIPK3Q9H422 SLC22A20-204ENST00000530038 1673 ntBASIC18.49■□□□□ 0.55
HIPK3Q9H422 LINC00304-203ENST00000565008 1864 ntBASIC18.49■□□□□ 0.55
HIPK3Q9H422 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIPK3Q9H422 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
HIPK3Q9H422 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.49■□□□□ 0.55
HIPK3Q9H422 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIPK3Q9H422 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
HIPK3Q9H422 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HIPK3Q9H422 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HIPK3Q9H422 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HIPK3Q9H422 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIPK3Q9H422 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIPK3Q9H422 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HIPK3Q9H422 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIPK3Q9H422 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HIPK3Q9H422 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.48■□□□□ 0.55
HIPK3Q9H422 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.48■□□□□ 0.55
HIPK3Q9H422 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.48■□□□□ 0.55
HIPK3Q9H422 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.48■□□□□ 0.55
HIPK3Q9H422 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HIPK3Q9H422 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HIPK3Q9H422 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.48■□□□□ 0.55
HIPK3Q9H422 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.48■□□□□ 0.55
HIPK3Q9H422 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.48■□□□□ 0.55
HIPK3Q9H422 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms