Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.73■□□□□ 0.11
TRIM2Q9C040 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.73■□□□□ 0.11
TRIM2Q9C040 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM2Q9C040 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM2Q9C040 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM2Q9C040 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TRIM2Q9C040 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM2Q9C040 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TRIM2Q9C040 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM2Q9C040 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM2Q9C040 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.73■□□□□ 0.11
TRIM2Q9C040 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM2Q9C040 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM2Q9C040 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM2Q9C040 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM2Q9C040 FRMD8P1-201ENST00000440433 1524 ntBASIC15.73■□□□□ 0.11
TRIM2Q9C040 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM2Q9C040 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM2Q9C040 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM2Q9C040 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM2Q9C040 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM2Q9C040 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM2Q9C040 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM2Q9C040 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM2Q9C040 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.72■□□□□ 0.11
TRIM2Q9C040 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM2Q9C040 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM2Q9C040 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRIM2Q9C040 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM2Q9C040 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM2Q9C040 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM2Q9C040 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM2Q9C040 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM2Q9C040 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.72■□□□□ 0.11
TRIM2Q9C040 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
TRIM2Q9C040 FAAHP1-202ENST00000446499 1238 ntBASIC15.72■□□□□ 0.11
TRIM2Q9C040 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM2Q9C040 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.72■□□□□ 0.11
TRIM2Q9C040 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM2Q9C040 AC091304.2-201ENST00000564639 760 ntBASIC15.72■□□□□ 0.11
TRIM2Q9C040 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.72■□□□□ 0.11
TRIM2Q9C040 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.72■□□□□ 0.11
TRIM2Q9C040 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM2Q9C040 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.72■□□□□ 0.11
TRIM2Q9C040 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM2Q9C040 IFNL4P1-201ENST00000607083 540 ntBASIC15.72■□□□□ 0.11
TRIM2Q9C040 AL732292.2-201ENST00000609649 430 ntBASIC15.72■□□□□ 0.11
TRIM2Q9C040 AC073592.4-201ENST00000623827 446 ntBASIC15.72■□□□□ 0.11
TRIM2Q9C040 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TRIM2Q9C040 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM2Q9C040 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM2Q9C040 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TRIM2Q9C040 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM2Q9C040 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM2Q9C040 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM2Q9C040 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM2Q9C040 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.72■□□□□ 0.11
TRIM2Q9C040 AC084018.2-201ENST00000613093 2607 ntBASIC15.72■□□□□ 0.11
TRIM2Q9C040 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM2Q9C040 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM2Q9C040 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM2Q9C040 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM2Q9C040 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM2Q9C040 AC092068.3-201ENST00000587894 2016 ntBASIC15.72■□□□□ 0.11
TRIM2Q9C040 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM2Q9C040 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM2Q9C040 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.71■□□□□ 0.11
TRIM2Q9C040 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM2Q9C040 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM2Q9C040 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
TRIM2Q9C040 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM2Q9C040 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM2Q9C040 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TRIM2Q9C040 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM2Q9C040 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TRIM2Q9C040 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
TRIM2Q9C040 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM2Q9C040 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.71■□□□□ 0.11
TRIM2Q9C040 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM2Q9C040 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM2Q9C040 KRT18P31-201ENST00000506277 1292 ntBASIC15.71■□□□□ 0.11
TRIM2Q9C040 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TRIM2Q9C040 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.71■□□□□ 0.11
TRIM2Q9C040 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM2Q9C040 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.71■□□□□ 0.11
TRIM2Q9C040 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM2Q9C040 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM2Q9C040 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM2Q9C040 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TRIM2Q9C040 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM2Q9C040 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM2Q9C040 AC148477.5-201ENST00000625164 1645 ntBASIC15.71■□□□□ 0.11
TRIM2Q9C040 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRIM2Q9C040 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.71■□□□□ 0.1
TRIM2Q9C040 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRIM2Q9C040 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRIM2Q9C040 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
TRIM2Q9C040 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM2Q9C040 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM2Q9C040 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms