Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 CD7-202ENST00000578509 925 ntTSL 3 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 AC099522.2-201ENST00000607001 744 ntBASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 GGTLC5P-201ENST00000617623 998 ntBASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 MED16-214ENST00000617672 554 ntTSL 5 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 REXO1L3P-201ENST00000622202 1288 ntBASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 AC093525.9-201ENST00000624961 1746 ntBASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC5.78□□□□□ -1.48
KRTAP4-3Q9BYR4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
KRTAP4-3Q9BYR4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
KRTAP4-3Q9BYR4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 AL671710.1-201ENST00000610245 2349 ntBASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 GNAS-203ENST00000306120 1878 ntBASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 UBALD1-205ENST00000590891 2641 ntBASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 HMGA1P7-201ENST00000406908 502 ntBASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 FAM58DP-201ENST00000428076 619 ntBASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 TIMM8BP1-201ENST00000452384 211 ntBASIC5.77□□□□□ -1.49
KRTAP4-3Q9BYR4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms