Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NDUFAF3Q9BU61 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NDUFAF3Q9BU61 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NDUFAF3Q9BU61 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.27□□□□□ -0.29
NDUFAF3Q9BU61 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 TNRC18P2-201ENST00000417666 2714 ntBASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 GMCL1P1-201ENST00000463439 1581 ntBASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 AC011558.1-201ENST00000623459 338 ntBASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
NDUFAF3Q9BU61 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 AL499627.1-201ENST00000569373 2188 ntBASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 AC006058.4-201ENST00000624016 1670 ntBASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 MIR149-201ENST00000384879 89 ntBASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 NEK4P2-201ENST00000580004 1012 ntBASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 AL023973.1-201ENST00000624619 620 ntBASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC13.25□□□□□ -0.29
NDUFAF3Q9BU61 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms