Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HERPUD2Q9BSE4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HERPUD2Q9BSE4 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.66■□□□□ 0.42
HERPUD2Q9BSE4 AC005052.1-201ENST00000625181 2492 ntBASIC17.66■□□□□ 0.42
HERPUD2Q9BSE4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.66■□□□□ 0.42
HERPUD2Q9BSE4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HERPUD2Q9BSE4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HERPUD2Q9BSE4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HERPUD2Q9BSE4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HERPUD2Q9BSE4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HERPUD2Q9BSE4 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HERPUD2Q9BSE4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.66■□□□□ 0.42
HERPUD2Q9BSE4 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.66■□□□□ 0.42
HERPUD2Q9BSE4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.66■□□□□ 0.42
HERPUD2Q9BSE4 TPM4P1-201ENST00000436100 807 ntBASIC17.66■□□□□ 0.42
HERPUD2Q9BSE4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.66■□□□□ 0.42
HERPUD2Q9BSE4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.66■□□□□ 0.42
HERPUD2Q9BSE4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.66■□□□□ 0.42
HERPUD2Q9BSE4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HERPUD2Q9BSE4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
HERPUD2Q9BSE4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.66■□□□□ 0.42
HERPUD2Q9BSE4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.66■□□□□ 0.42
HERPUD2Q9BSE4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
HERPUD2Q9BSE4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
HERPUD2Q9BSE4 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HERPUD2Q9BSE4 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.66■□□□□ 0.42
HERPUD2Q9BSE4 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.66■□□□□ 0.42
HERPUD2Q9BSE4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HERPUD2Q9BSE4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HERPUD2Q9BSE4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HERPUD2Q9BSE4 AL391005.1-201ENST00000623953 2435 ntBASIC17.66■□□□□ 0.42
HERPUD2Q9BSE4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HERPUD2Q9BSE4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HERPUD2Q9BSE4 AC243591.1-201ENST00000452967 1364 ntBASIC17.66■□□□□ 0.42
HERPUD2Q9BSE4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
HERPUD2Q9BSE4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 AC026691.1-201ENST00000602502 2017 ntBASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 CICP6-201ENST00000457191 2729 ntBASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 TSPY19P-201ENST00000418461 509 ntBASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 TSPY18P-201ENST00000441642 509 ntBASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 FOSL1P1-201ENST00000511041 816 ntBASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 TUBB8P12-201ENST00000308911 1335 ntBASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 TUBB7P-202ENST00000428444 1305 ntBASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 TUBB8P7-204ENST00000567960 1332 ntBASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HERPUD2Q9BSE4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
HERPUD2Q9BSE4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
HERPUD2Q9BSE4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.64■□□□□ 0.41
HERPUD2Q9BSE4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HERPUD2Q9BSE4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HERPUD2Q9BSE4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HERPUD2Q9BSE4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HERPUD2Q9BSE4 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HERPUD2Q9BSE4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
HERPUD2Q9BSE4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.64■□□□□ 0.41
HERPUD2Q9BSE4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HERPUD2Q9BSE4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HERPUD2Q9BSE4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
HERPUD2Q9BSE4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HERPUD2Q9BSE4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HERPUD2Q9BSE4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HERPUD2Q9BSE4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.64■□□□□ 0.41
HERPUD2Q9BSE4 AC106795.1-205ENST00000512851 1056 ntBASIC17.64■□□□□ 0.41
HERPUD2Q9BSE4 NKAPP1-205ENST00000585790 367 ntBASIC17.64■□□□□ 0.41
HERPUD2Q9BSE4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HERPUD2Q9BSE4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.64■□□□□ 0.41
HERPUD2Q9BSE4 LINC01711-201ENST00000598340 967 ntBASIC17.64■□□□□ 0.41
HERPUD2Q9BSE4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms