Protein–RNA interactions for Protein: Q9BS92

NIPSNAP3B, Protein NipSnap homolog 3B, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3BQ9BS92 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 MMP23A-201ENST00000234610 1017 ntBASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 MIR1238-201ENST00000408483 83 ntBASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 MFAP1P1-201ENST00000442257 1255 ntBASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 AC097488.1-201ENST00000507834 756 ntBASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 AP000525.1-201ENST00000608286 694 ntBASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 AC034236.2-201ENST00000606662 1610 ntBASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 OR2I1P-209ENST00000641730 5365 ntBASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 AC096733.2-201ENST00000609937 1394 ntBASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.7□□□□□ -0.22
NIPSNAP3BQ9BS92 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 AC022898.2-201ENST00000616822 1312 ntBASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 MIR564-202ENST00000385049 94 ntBASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 MESTP1-201ENST00000404287 994 ntBASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 MCCD1P1-208ENST00000445732 328 ntBASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 TSPY15P-201ENST00000457163 923 ntBASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 AC116407.2-201ENST00000613639 860 ntBASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 GLDC-219ENST00000640208 420 ntTSL 2 BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NIPSNAP3BQ9BS92 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
NIPSNAP3BQ9BS92 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
NIPSNAP3BQ9BS92 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NIPSNAP3BQ9BS92 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
NIPSNAP3BQ9BS92 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NIPSNAP3BQ9BS92 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NIPSNAP3BQ9BS92 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NIPSNAP3BQ9BS92 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NIPSNAP3BQ9BS92 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NIPSNAP3BQ9BS92 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms