Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RPRD1AQ96P16 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPRD1AQ96P16 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.56■□□□□ 0.4
RPRD1AQ96P16 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPRD1AQ96P16 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.55■□□□□ 0.4
RPRD1AQ96P16 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RPRD1AQ96P16 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPRD1AQ96P16 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.55■□□□□ 0.4
RPRD1AQ96P16 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPRD1AQ96P16 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RPRD1AQ96P16 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPRD1AQ96P16 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPRD1AQ96P16 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RPRD1AQ96P16 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPRD1AQ96P16 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.55■□□□□ 0.4
RPRD1AQ96P16 PMS2P7-201ENST00000506558 1336 ntBASIC17.55■□□□□ 0.4
RPRD1AQ96P16 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RPRD1AQ96P16 IGLL3P-201ENST00000412472 434 ntBASIC17.55■□□□□ 0.4
RPRD1AQ96P16 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RPRD1AQ96P16 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.55■□□□□ 0.4
RPRD1AQ96P16 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RPRD1AQ96P16 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.55■□□□□ 0.4
RPRD1AQ96P16 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.55■□□□□ 0.4
RPRD1AQ96P16 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RPRD1AQ96P16 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RPRD1AQ96P16 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPRD1AQ96P16 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPRD1AQ96P16 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPRD1AQ96P16 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPRD1AQ96P16 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RPRD1AQ96P16 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPRD1AQ96P16 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RPRD1AQ96P16 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RPRD1AQ96P16 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RPRD1AQ96P16 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RPRD1AQ96P16 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPRD1AQ96P16 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RPRD1AQ96P16 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.54■□□□□ 0.4
RPRD1AQ96P16 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.54■□□□□ 0.4
RPRD1AQ96P16 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
RPRD1AQ96P16 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RPRD1AQ96P16 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPRD1AQ96P16 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPRD1AQ96P16 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.54■□□□□ 0.4
RPRD1AQ96P16 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RPRD1AQ96P16 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.54■□□□□ 0.4
RPRD1AQ96P16 KRT18P2-201ENST00000447938 1258 ntBASIC17.54■□□□□ 0.4
RPRD1AQ96P16 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.54■□□□□ 0.4
RPRD1AQ96P16 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.54■□□□□ 0.4
RPRD1AQ96P16 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPRD1AQ96P16 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.54■□□□□ 0.4
RPRD1AQ96P16 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.54■□□□□ 0.4
RPRD1AQ96P16 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RPRD1AQ96P16 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPRD1AQ96P16 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RPRD1AQ96P16 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RPRD1AQ96P16 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RPRD1AQ96P16 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
RPRD1AQ96P16 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RPRD1AQ96P16 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPRD1AQ96P16 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RPRD1AQ96P16 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RPRD1AQ96P16 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RPRD1AQ96P16 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
RPRD1AQ96P16 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 AC129492.6-201ENST00000611383 1305 ntBASIC17.53■□□□□ 0.4
RPRD1AQ96P16 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 CXCL1P1-201ENST00000502804 216 ntBASIC17.53■□□□□ 0.4
RPRD1AQ96P16 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 AC124947.2-201ENST00000547118 1133 ntBASIC17.53■□□□□ 0.4
RPRD1AQ96P16 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.53■□□□□ 0.4
RPRD1AQ96P16 AC018845.2-201ENST00000568326 409 ntBASIC17.53■□□□□ 0.4
RPRD1AQ96P16 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms