Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 MYCLP2-201ENST00000449268 967 ntBASIC18.29■□□□□ 0.52
ALPK3Q96L96 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC18.29■□□□□ 0.52
ALPK3Q96L96 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
ALPK3Q96L96 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.29■□□□□ 0.52
ALPK3Q96L96 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ALPK3Q96L96 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.28■□□□□ 0.52
ALPK3Q96L96 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ALPK3Q96L96 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.28■□□□□ 0.52
ALPK3Q96L96 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ALPK3Q96L96 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.28■□□□□ 0.52
ALPK3Q96L96 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
ALPK3Q96L96 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
ALPK3Q96L96 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
ALPK3Q96L96 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.28■□□□□ 0.52
ALPK3Q96L96 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ALPK3Q96L96 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.28■□□□□ 0.52
ALPK3Q96L96 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC18.28■□□□□ 0.52
ALPK3Q96L96 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ALPK3Q96L96 GOLGA2P4-201ENST00000441462 777 ntBASIC18.28■□□□□ 0.52
ALPK3Q96L96 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.28■□□□□ 0.52
ALPK3Q96L96 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.28■□□□□ 0.52
ALPK3Q96L96 RHOQP1-201ENST00000555758 579 ntBASIC18.28■□□□□ 0.52
ALPK3Q96L96 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ALPK3Q96L96 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ALPK3Q96L96 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ALPK3Q96L96 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ALPK3Q96L96 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
ALPK3Q96L96 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.28■□□□□ 0.52
ALPK3Q96L96 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ALPK3Q96L96 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ALPK3Q96L96 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ALPK3Q96L96 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ALPK3Q96L96 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ALPK3Q96L96 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.27■□□□□ 0.52
ALPK3Q96L96 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.27■□□□□ 0.52
ALPK3Q96L96 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ALPK3Q96L96 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ALPK3Q96L96 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.27■□□□□ 0.52
ALPK3Q96L96 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.27■□□□□ 0.52
ALPK3Q96L96 AC015936.2-201ENST00000593177 259 ntBASIC18.27■□□□□ 0.52
ALPK3Q96L96 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.27■□□□□ 0.52
ALPK3Q96L96 CYP2A7P1-201ENST00000595391 815 ntBASIC18.27■□□□□ 0.52
ALPK3Q96L96 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ALPK3Q96L96 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC18.27■□□□□ 0.52
ALPK3Q96L96 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
ALPK3Q96L96 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ALPK3Q96L96 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ALPK3Q96L96 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
ALPK3Q96L96 AC004408.2-201ENST00000623613 2777 ntBASIC18.27■□□□□ 0.51
ALPK3Q96L96 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.27■□□□□ 0.51
ALPK3Q96L96 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ALPK3Q96L96 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.27■□□□□ 0.51
ALPK3Q96L96 AC099336.1-201ENST00000417053 1171 ntBASIC18.27■□□□□ 0.51
ALPK3Q96L96 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.51
ALPK3Q96L96 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.27■□□□□ 0.51
ALPK3Q96L96 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC18.27■□□□□ 0.51
ALPK3Q96L96 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.27■□□□□ 0.51
ALPK3Q96L96 AL583810.1-201ENST00000553344 1045 ntBASIC18.27■□□□□ 0.51
ALPK3Q96L96 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.27■□□□□ 0.51
ALPK3Q96L96 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.27■□□□□ 0.51
ALPK3Q96L96 AC004461.2-201ENST00000629517 803 ntBASIC18.27■□□□□ 0.51
ALPK3Q96L96 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ALPK3Q96L96 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
ALPK3Q96L96 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ALPK3Q96L96 REXO1L9P-201ENST00000604264 2108 ntBASIC18.26■□□□□ 0.51
ALPK3Q96L96 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
ALPK3Q96L96 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALPK3Q96L96 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.26■□□□□ 0.51
ALPK3Q96L96 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ALPK3Q96L96 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALPK3Q96L96 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALPK3Q96L96 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ALPK3Q96L96 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.26■□□□□ 0.51
ALPK3Q96L96 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC18.26■□□□□ 0.51
ALPK3Q96L96 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.26■□□□□ 0.51
ALPK3Q96L96 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC18.26■□□□□ 0.51
ALPK3Q96L96 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ALPK3Q96L96 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.26■□□□□ 0.51
ALPK3Q96L96 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.26■□□□□ 0.51
ALPK3Q96L96 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.26■□□□□ 0.51
ALPK3Q96L96 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ALPK3Q96L96 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ALPK3Q96L96 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.26■□□□□ 0.51
ALPK3Q96L96 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
ALPK3Q96L96 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.26■□□□□ 0.51
ALPK3Q96L96 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ALPK3Q96L96 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.26■□□□□ 0.51
ALPK3Q96L96 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.26■□□□□ 0.51
ALPK3Q96L96 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ALPK3Q96L96 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALPK3Q96L96 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALPK3Q96L96 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALPK3Q96L96 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALPK3Q96L96 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.26■□□□□ 0.51
ALPK3Q96L96 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.26■□□□□ 0.51
ALPK3Q96L96 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
ALPK3Q96L96 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ALPK3Q96L96 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.25■□□□□ 0.51
ALPK3Q96L96 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC18.25■□□□□ 0.51
ALPK3Q96L96 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms