Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ECHDC3Q96DC8 HCG4-201ENST00000418983 998 ntBASIC16.99■□□□□ 0.31
ECHDC3Q96DC8 BX842568.4-201ENST00000421222 227 ntBASIC16.99■□□□□ 0.31
ECHDC3Q96DC8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.99■□□□□ 0.31
ECHDC3Q96DC8 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ECHDC3Q96DC8 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.99■□□□□ 0.31
ECHDC3Q96DC8 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.99■□□□□ 0.31
ECHDC3Q96DC8 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
ECHDC3Q96DC8 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.99■□□□□ 0.31
ECHDC3Q96DC8 MIR4492-201ENST00000581627 80 ntBASIC16.99■□□□□ 0.31
ECHDC3Q96DC8 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.99■□□□□ 0.31
ECHDC3Q96DC8 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.99■□□□□ 0.31
ECHDC3Q96DC8 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ECHDC3Q96DC8 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.99■□□□□ 0.31
ECHDC3Q96DC8 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.99■□□□□ 0.31
ECHDC3Q96DC8 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
ECHDC3Q96DC8 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.99■□□□□ 0.31
ECHDC3Q96DC8 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.99■□□□□ 0.31
ECHDC3Q96DC8 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
ECHDC3Q96DC8 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
ECHDC3Q96DC8 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ECHDC3Q96DC8 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ECHDC3Q96DC8 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.99■□□□□ 0.31
ECHDC3Q96DC8 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.99■□□□□ 0.31
ECHDC3Q96DC8 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ECHDC3Q96DC8 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ECHDC3Q96DC8 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.97■□□□□ 0.31
ECHDC3Q96DC8 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ECHDC3Q96DC8 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ECHDC3Q96DC8 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ECHDC3Q96DC8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ECHDC3Q96DC8 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ECHDC3Q96DC8 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ECHDC3Q96DC8 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.97■□□□□ 0.31
ECHDC3Q96DC8 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ECHDC3Q96DC8 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.97■□□□□ 0.31
ECHDC3Q96DC8 AC131009.4-201ENST00000624048 1740 ntBASIC16.97■□□□□ 0.31
ECHDC3Q96DC8 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ECHDC3Q96DC8 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ECHDC3Q96DC8 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.97■□□□□ 0.31
ECHDC3Q96DC8 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ECHDC3Q96DC8 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
ECHDC3Q96DC8 AC074386.1-202ENST00000463561 864 ntBASIC16.97■□□□□ 0.31
ECHDC3Q96DC8 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ECHDC3Q96DC8 AL031432.2-201ENST00000566714 459 ntBASIC16.97■□□□□ 0.31
ECHDC3Q96DC8 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.97■□□□□ 0.31
ECHDC3Q96DC8 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ECHDC3Q96DC8 AL928711.1-201ENST00000570165 459 ntBASIC16.97■□□□□ 0.31
ECHDC3Q96DC8 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.97■□□□□ 0.31
ECHDC3Q96DC8 MTDHP5-201ENST00000598980 586 ntBASIC16.97■□□□□ 0.31
ECHDC3Q96DC8 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
ECHDC3Q96DC8 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
ECHDC3Q96DC8 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
ECHDC3Q96DC8 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.97■□□□□ 0.31
ECHDC3Q96DC8 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.97■□□□□ 0.31
ECHDC3Q96DC8 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ECHDC3Q96DC8 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ECHDC3Q96DC8 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms