Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 Z83851.2-201ENST00000609564 659 ntBASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 BX640515.1-201ENST00000617215 977 ntBASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 AL139011.1-202ENST00000642063 584 ntBASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 FLJ38576-201ENST00000623820 2459 ntBASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTHRC1Q96CG8 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 IL9RP2-201ENST00000423948 1312 ntBASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 VN2R19P-201ENST00000442399 1052 ntBASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 FAM185BP-201ENST00000443595 716 ntBASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 AC034105.1-201ENST00000563488 319 ntBASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 AC005412.3-201ENST00000580309 715 ntBASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 AL353732.1-201ENST00000569618 1459 ntBASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 SLC22A20-204ENST00000530038 1673 ntBASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTHRC1Q96CG8 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 AP000347.1-202ENST00000435868 847 ntBASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.74■□□□□ 0.11
CTHRC1Q96CG8 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms