Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN23Q96B33 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN23Q96B33 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN23Q96B33 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CLDN23Q96B33 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLDN23Q96B33 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN23Q96B33 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN23Q96B33 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CLDN23Q96B33 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN23Q96B33 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CLDN23Q96B33 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.84■□□□□ 0.29
CLDN23Q96B33 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN23Q96B33 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.84■□□□□ 0.29
CLDN23Q96B33 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CLDN23Q96B33 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN23Q96B33 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN23Q96B33 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN23Q96B33 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN23Q96B33 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN23Q96B33 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.83■□□□□ 0.28
CLDN23Q96B33 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN23Q96B33 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN23Q96B33 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN23Q96B33 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
CLDN23Q96B33 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.83■□□□□ 0.28
CLDN23Q96B33 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN23Q96B33 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN23Q96B33 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.83■□□□□ 0.28
CLDN23Q96B33 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
CLDN23Q96B33 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.83■□□□□ 0.28
CLDN23Q96B33 RN7SL752P-201ENST00000463779 287 ntBASIC16.83■□□□□ 0.28
CLDN23Q96B33 PRYP6-201ENST00000514804 343 ntBASIC16.83■□□□□ 0.28
CLDN23Q96B33 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CLDN23Q96B33 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.83■□□□□ 0.28
CLDN23Q96B33 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.83■□□□□ 0.28
CLDN23Q96B33 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN23Q96B33 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.83■□□□□ 0.28
CLDN23Q96B33 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN23Q96B33 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLDN23Q96B33 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.83■□□□□ 0.28
CLDN23Q96B33 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CLDN23Q96B33 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN23Q96B33 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CLDN23Q96B33 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN23Q96B33 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CLDN23Q96B33 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.82■□□□□ 0.28
CLDN23Q96B33 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.82■□□□□ 0.28
CLDN23Q96B33 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN23Q96B33 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN23Q96B33 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN23Q96B33 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN23Q96B33 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDN23Q96B33 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CLDN23Q96B33 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CLDN23Q96B33 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN23Q96B33 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CLDN23Q96B33 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.82■□□□□ 0.28
CLDN23Q96B33 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.82■□□□□ 0.28
CLDN23Q96B33 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.82■□□□□ 0.28
CLDN23Q96B33 MTND6P24-201ENST00000440466 518 ntBASIC16.82■□□□□ 0.28
CLDN23Q96B33 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN23Q96B33 GNAQP1-201ENST00000444815 1067 ntBASIC16.82■□□□□ 0.28
CLDN23Q96B33 AC011495.1-201ENST00000498085 584 ntBASIC16.82■□□□□ 0.28
CLDN23Q96B33 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.82■□□□□ 0.28
CLDN23Q96B33 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.82■□□□□ 0.28
CLDN23Q96B33 AC135586.1-201ENST00000539323 574 ntBASIC16.82■□□□□ 0.28
CLDN23Q96B33 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDN23Q96B33 MIR6805-201ENST00000615055 62 ntBASIC16.82■□□□□ 0.28
CLDN23Q96B33 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.82■□□□□ 0.28
CLDN23Q96B33 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDN23Q96B33 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN23Q96B33 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CLDN23Q96B33 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN23Q96B33 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
CLDN23Q96B33 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN23Q96B33 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CLDN23Q96B33 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN23Q96B33 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CLDN23Q96B33 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CLDN23Q96B33 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDN23Q96B33 AL138781.2-201ENST00000617896 1843 ntBASIC16.82■□□□□ 0.28
CLDN23Q96B33 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.82■□□□□ 0.28
CLDN23Q96B33 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLDN23Q96B33 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN23Q96B33 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN23Q96B33 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CLDN23Q96B33 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.81■□□□□ 0.28
CLDN23Q96B33 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN23Q96B33 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN23Q96B33 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.81■□□□□ 0.28
CLDN23Q96B33 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CLDN23Q96B33 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CLDN23Q96B33 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN23Q96B33 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN23Q96B33 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CLDN23Q96B33 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CLDN23Q96B33 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLDN23Q96B33 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.81■□□□□ 0.28
CLDN23Q96B33 MIR1909-201ENST00000411312 80 ntBASIC16.81■□□□□ 0.28
CLDN23Q96B33 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms